RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TIMM8AO60220 97 aaPredicted RBP11.73□□□□□ -0.53
MSH5-206ENST00000423982 MGST1P10620 155 aaKnown RBP11.73□□□□□ -0.53
MSH5-206ENST00000423982 KIR2DL2P43627 348 aaPredicted RBP11.73□□□□□ -0.53
MSH5-206ENST00000423982 ERVK-16P61578 105 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 RPP30P78346 268 aaKnown RBP11.73□□□□□ -0.53
MSH5-206ENST00000423982 AARDQ4LEZ3 155 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 COL5A1-AS1Q5SY13 56 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 Q6ZN92 141 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 NIT1Q86X76 327 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 WDR31Q8NA23 367 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 ZNRF1Q8ND25 227 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 LRRC29Q8WV35 223 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 SLC35E1Q96K37 410 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 LINC00479Q96M42 142 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 RNF2Q99496 336 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 IGKV1OR2-108A0A075B7D4 117 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 GGTLC3B5MD39 225 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 LINC00614P0C842 121 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 LINC00869P0C866 280 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 NPY1RP25929 384 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 CX3CL1P78423 397 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 SPRNQ5BIV9 151 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 OR4B1Q8NGF8 309 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 S1PR3Q99500 378 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 TXN2Q99757 166 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 IFI27L2Q9H2X8 130 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 PPP1R14DQ9NXH3 145 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 TP73-AS1Q9UF72 201 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 PRDX2P32119 198 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 PCP4P48539 62 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 SLC24A4Q8NFF2 622 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 KCNS1Q96KK3 526 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 TUBG2Q9NRH3 451 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 ZFP30Q9Y2G7 519 aa11.73□□□□□ -0.53
MSH5-206ENST00000423982 PRRG2O14669 202 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 OR7C2O60412 319 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 IGLC2P0DOY2 106 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 IGLC3P0DOY3 106 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 FAM90A1Q86YD7 464 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 CXXC4Q9H2H0 198 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 CDC42EP3Q9UKI2 254 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 YLPM1P49750 1951 aaKnown RBP11.72□□□□□ -0.53
MSH5-206ENST00000423982 IGKV1D-17A0A075B6S4 117 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 TRAV9-1A0A075B6T8 112 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 PRR20EP86478 221 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 PRR20CP86479 221 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 PRR20DP86480 221 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 PRR20BP86481 221 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 PRR20AP86496 221 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 KLRB1Q12918 225 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 SLAQ13239 276 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 C1orf185Q5T7R7 199 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 OR4A47Q6IF82 309 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
MSH5-206ENST00000423982 FAM57AQ8TBR7 257 aa11.72□□□□□ -0.53
MSH5-206ENST00000423982 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.53
MSH5-206ENST00000423982 IGLV2-8P01709 118 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 ADH4P08319 380 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 OR5G3P0C626 314 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 LOXL3P58215 753 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 SMIM21Q3B7S5 101 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 FAM201AQ5SY85 155 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 PRR7Q8TB68 274 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 TSKUQ8WUA8 353 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 NABP2Q9BQ15 211 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 CHODLQ9H9P2 273 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 SLC45A2Q9UMX9 530 aa11.71□□□□□ -0.53
MSH5-206ENST00000423982 SPTBN1Q01082 2364 aaKnown RBP11.71□□□□□ -0.54
MSH5-206ENST00000423982 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.71□□□□□ -0.54
MSH5-206ENST00000423982 HINT1P49773 126 aaPredicted RBP11.71□□□□□ -0.54
MSH5-206ENST00000423982 MORN5Q5VZ52 161 aa11.71□□□□□ -0.54
MSH5-206ENST00000423982 OR52E5Q8NH55 327 aa11.71□□□□□ -0.54
MSH5-206ENST00000423982 SPTAN1Q13813 2472 aaKnown RBP11.7□□□□□ -0.54
MSH5-206ENST00000423982 TRGV8A0A0C4DH27 118 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 DPRXA6NFQ7 191 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 AREGP15514 252 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
MSH5-206ENST00000423982 ZNRD1Q9P1U0 126 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 LAMTOR2Q9Y2Q5 125 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 DSCAMO60469 2012 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 ROS1P08922 2347 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 TRAV5A0A0B4J249 113 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 CCL25O15444 150 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 IBA57Q5T440 356 aaKnown RBP11.7□□□□□ -0.54
MSH5-206ENST00000423982 DUX4L9Q6RFH8 374 aaPredicted RBP11.7□□□□□ -0.54
MSH5-206ENST00000423982 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
MSH5-206ENST00000423982 MT-CO2P00403 227 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 TIGITQ495A1 244 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 OR2Z1Q8NG97 314 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 UQCR10Q9UDW1 63 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 IL19Q9UHD0 177 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 GPR6P46095 362 aaPredicted RBP11.69□□□□□ -0.54
MSH5-206ENST00000423982 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 DDB2Q92466 427 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 LY96Q9Y6Y9 160 aa11.69□□□□□ -0.54
MSH5-206ENST00000423982 SAA2-SAA4A0A096LPE2 208 aa11.68□□□□□ -0.54
MSH5-206ENST00000423982 TRBV9A0A0B4J1U6 114 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms