RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FCGR2BP31994 310 aaPredicted RBP11.94□□□□□ -0.5
COL18A1-205ENST00000423214 TFPI2P48307 235 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 TMEM116Q8NCL8 245 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 RNF2Q99496 336 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 RHPN1-AS1Q9BWJ2 59 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 MAP6D1Q9H9H5 199 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 MTFP1Q9UDX5 166 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 SMPXQ9UHP9 88 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 PI3P19957 117 aa11.93□□□□□ -0.5
COL18A1-205ENST00000423214 MFAP4P55083 255 aa11.93□□□□□ -0.5
COL18A1-205ENST00000423214 UCP3P55916 312 aa11.93□□□□□ -0.5
COL18A1-205ENST00000423214 RNASE10Q5GAN6 216 aaKnown RBP11.93□□□□□ -0.5
COL18A1-205ENST00000423214 H2BFWTQ7Z2G1 175 aa11.93□□□□□ -0.5
COL18A1-205ENST00000423214 OR4D10Q8NGI6 311 aa11.93□□□□□ -0.5
COL18A1-205ENST00000423214 OR4A16Q8NH70 328 aa11.93□□□□□ -0.5
COL18A1-205ENST00000423214 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 DBX1A6NMT0 343 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 CHEK1O14757 476 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 GNG7O60262 68 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 CTSGP08311 255 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 PGAM2P15259 253 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 CMC4P56277 68 aaPredicted RBP11.92□□□□□ -0.5
COL18A1-205ENST00000423214 RAB2BQ8WUD1 216 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 PINX1Q96BK5 328 aaKnown RBP11.92□□□□□ -0.5
COL18A1-205ENST00000423214 TXN2Q99757 166 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 GINS3Q9BRX5 216 aa11.92□□□□□ -0.5
COL18A1-205ENST00000423214 FAM212BQ9NTI7 297 aaPredicted RBP11.92□□□□□ -0.5
COL18A1-205ENST00000423214 KMT2AQ03164 3969 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 MPTX1A8MV57 137 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 MT-CO2P00403 227 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 IGKV1-39P01597 117 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 IGKV1D-39P04432 117 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 TMBIM6P55061 237 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 PAFAH1B2P68402 229 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 PRCDQ00LT1 54 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 ZNF124Q15973 351 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 ZNF114Q8NC26 417 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 DYNC2LI1Q8TCX1 351 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 GATAD1Q8WUU5 269 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 PHLDA1Q8WV24 401 aaPredicted RBP11.91□□□□□ -0.5
COL18A1-205ENST00000423214 MRGPRFQ96AM1 343 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 OR10C1Q96KK4 312 aa11.91□□□□□ -0.5
COL18A1-205ENST00000423214 NXF2Q9GZY0 626 aaKnown RBP11.91□□□□□ -0.5
COL18A1-205ENST00000423214 IGHV3OR16-13A0A075B7E8 117 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 TRAV14DV4A0A0A6YYC5 116 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 IGHV3-74A0A0B4J1X5 117 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 I3L2K1 104 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 RPL5P46777 297 aaKnown RBP11.9□□□□□ -0.5
COL18A1-205ENST00000423214 PPP5CP53041 499 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 SCGB2B2Q4G0G5 96 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 LHFPL1Q86WI0 220 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 GBGT1Q8N5D6 347 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 TMEM229BQ8NBD8 167 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 C15orf40Q8WUR7 153 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 DIRAS2Q96HU8 199 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 SEC22AQ96IW7 307 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 CSTL1Q9H114 145 aa11.9□□□□□ -0.5
COL18A1-205ENST00000423214 GABARAPH6UMI1 98 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 RAB3DO95716 219 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 IGHV3-48P01763 117 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 PIGPP57054 158 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 TAS2R19P59542 299 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 ERHP84090 104 aaKnown RBP11.89□□□□□ -0.51
COL18A1-205ENST00000423214 IL18Q14116 193 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 FAAP20Q6NZ36 180 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 STEAP1BQ6NZ63 245 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 ARRDC1Q8N5I2 433 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 RARRES2Q99969 163 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 MFFQ9GZY8 342 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 AGRNO00468 2067 aa11.89□□□□□ -0.51
COL18A1-205ENST00000423214 H3BMQ9 156 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 ST8SIA3O43173 380 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
COL18A1-205ENST00000423214 CD74P04233 296 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 CD5P06127 495 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 RBMS2Q15434 407 aaKnown RBP11.88□□□□□ -0.51
COL18A1-205ENST00000423214 IZUMO4Q1ZYL8 232 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 TCF24Q7RTU0 167 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 SLC35G3Q8N808 338 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 TERB2Q8NHR7 220 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 C11orf68Q9H3H3 251 aaKnown RBP11.88□□□□□ -0.51
COL18A1-205ENST00000423214 CCDC59Q9P031 241 aaKnown RBP11.88□□□□□ -0.51
COL18A1-205ENST00000423214 FBXL17Q9UF56 701 aa11.88□□□□□ -0.51
COL18A1-205ENST00000423214 DNASE2O00115 360 aaPredicted RBP11.87□□□□□ -0.51
COL18A1-205ENST00000423214 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
COL18A1-205ENST00000423214 TBPP20226 339 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 SNCAP37840 140 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 NPBWR1P48145 328 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 AKR1C2P52895 323 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 RND3P61587 244 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 HSPE1P61604 102 aaKnown RBP11.87□□□□□ -0.51
COL18A1-205ENST00000423214 SP6Q3SY56 376 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 SPINK9Q5DT21 86 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 RPP25LQ8N5L8 163 aaKnown RBP11.87□□□□□ -0.51
COL18A1-205ENST00000423214 DUSP18Q8NEJ0 188 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 OR13C8Q8NGS7 320 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 OR11H2Q8NH07 326 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 C11orf45Q8TAV5 145 aa11.87□□□□□ -0.51
COL18A1-205ENST00000423214 MARCH1Q8TCQ1 289 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms