RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 LYG1Q8N1E2 194 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 LOC105371242A0A075B767 164 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 HSBP1O75506 76 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 IGLL1P15814 213 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 GPR6P46095 362 aaPredicted RBP17.39■□□□□ 0.37
USP48-205ENST00000421625 PMCHL1Q16048 86 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 MORN5Q5VZ52 161 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 SPATA12Q7Z6I5 190 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 ZNRF1Q8ND25 227 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 ZNF738Q8NE65 137 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 CORO2AQ92828 525 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 ZNF355PQ9NSJ1 428 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 OR51B2Q9Y5P1 312 aa17.39■□□□□ 0.37
USP48-205ENST00000421625 DMXL1Q9Y485 3027 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 M0R2Z0 102 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 KIR2DS2P43631 304 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 KIR3DL3Q8N743 410 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 C22orf15Q8WYQ4 148 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 TRAV9-2A0A087WT02 112 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 TRAV5A0A0B4J249 113 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 S100A7P31151 101 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 MFAP2P55001 183 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 RPL8P62917 257 aaKnown RBP17.38■□□□□ 0.37
USP48-205ENST00000421625 OR4F17Q8NGA8 305 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 OR9G1Q8NH87 305 aa17.38■□□□□ 0.37
USP48-205ENST00000421625 SSBP4Q9BWG4 385 aaPredicted RBP17.38■□□□□ 0.37
USP48-205ENST00000421625 C9orf172C9J069 976 aa17.37■□□□□ 0.37
USP48-205ENST00000421625 SAA2P0DJI9 122 aaPredicted RBP17.37■□□□□ 0.37
USP48-205ENST00000421625 CEACAM8P31997 349 aaPredicted RBP17.37■□□□□ 0.37
USP48-205ENST00000421625 RNASEKQ6P5S7 137 aaKnown RBP17.37■□□□□ 0.37
USP48-205ENST00000421625 INO80CQ6PI98 192 aaPredicted RBP17.37■□□□□ 0.37
USP48-205ENST00000421625 CNOT1A5YKK6 2376 aaKnown RBP17.37■□□□□ 0.37
USP48-205ENST00000421625 COL27A1Q8IZC6 1860 aaPredicted RBP17.36■□□□□ 0.37
USP48-205ENST00000421625 F2RL2O00254 374 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 ACP1P24666 158 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 CT45A1Q5HYN5 189 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 CT45A3Q8NHU0 189 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 GAL3ST2Q9H3Q3 398 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 KLF13Q9Y2Y9 288 aaPredicted RBP17.36■□□□□ 0.37
USP48-205ENST00000421625 TRGV5A0A0B4J1U4 118 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 IGHV2OR16-5A0A0B4J2B6 119 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 A0A1W2PN81 502 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 A0A1W2PRE2 83 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 OR8B3Q8NGG8 313 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 OR8B2Q96RD0 313 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 ALKBH7Q9BT30 221 aaPredicted RBP17.36■□□□□ 0.37
USP48-205ENST00000421625 TNFRSF19Q9NS68 423 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 CALYQ9NYX4 217 aa17.36■□□□□ 0.37
USP48-205ENST00000421625 IGLC7A0M8Q6 106 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 TBR1Q16650 682 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 ERASQ7Z444 233 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 NUP35Q8NFH5 326 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 H0YJW9 148 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 KLRC4-KLRK1H3BQV0 150 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 J3QR06 171 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 TAS2R45P59539 299 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 MDS2Q8NDY4 140 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 OR5B3Q8NH48 314 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 ST6GALNAC6Q969X2 333 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 SLC25A33Q9BSK2 321 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 SPRY4Q9C004 299 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 COMMD5Q9GZQ3 224 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 CLCF1Q9UBD9 225 aa17.35■□□□□ 0.37
USP48-205ENST00000421625 C2orf70A6NJV1 201 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 MGST3O14880 152 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 UBE2G1P62253 170 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 OR2Z1Q8NG97 314 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 WIPF2Q8TF74 440 aaPredicted RBP17.34■□□□□ 0.37
USP48-205ENST00000421625 MBD6Q96DN6 1003 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 CLEC5AQ9NY25 188 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 FNDC10F2Z333 226 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 C8orf88P0DMB2 117 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 FBLN7Q53RD9 439 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 SNRNP40Q96DI7 357 aaKnown RBP17.34■□□□□ 0.37
USP48-205ENST00000421625 CFAP47Q6ZTR5 3102 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 IGHV1-69-2A0A0G2JMI3 117 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 K7EP13 123 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 UBE2L3P68036 154 aaKnown RBP17.34■□□□□ 0.37
USP48-205ENST00000421625 RNF151Q2KHN1 245 aa17.34■□□□□ 0.37
USP48-205ENST00000421625 PCNX2A6NKB5 2137 aa17.33■□□□□ 0.37
USP48-205ENST00000421625 IGKV3-15P01624 115 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 CECR9P0C854 216 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 SPRNQ5BIV9 151 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 PRR27Q6MZM9 219 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 MUC15Q8N387 334 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 SLC25A2Q9BXI2 301 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 CAMPP49913 170 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 CR1LQ2VPA4 569 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 FAM167A-AS1Q96KT0 104 aa17.33■□□□□ 0.36
USP48-205ENST00000421625 SH2D7A6NKC9 451 aaPredicted RBP17.32■□□□□ 0.36
USP48-205ENST00000421625 CDX4O14627 284 aaPredicted RBP17.32■□□□□ 0.36
USP48-205ENST00000421625 TNFSF4P23510 183 aa17.32■□□□□ 0.36
USP48-205ENST00000421625 CNEP1R1Q8N9A8 125 aa17.32■□□□□ 0.36
USP48-205ENST00000421625 NUDT10Q8NFP7 164 aa17.32■□□□□ 0.36
USP48-205ENST00000421625 NUDT11Q96G61 164 aa17.32■□□□□ 0.36
USP48-205ENST00000421625 A0A1W2PNU3 283 aaPredicted RBP17.32■□□□□ 0.36
USP48-205ENST00000421625 SRRM5B3KS81 715 aa17.32■□□□□ 0.36
USP48-205ENST00000421625 PYYP10082 97 aa17.32■□□□□ 0.36
USP48-205ENST00000421625 KLF5Q13887 457 aaPredicted RBP17.32■□□□□ 0.36
USP48-205ENST00000421625 C17orf58Q2M2W7 97 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms