RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TXN2Q99757 166 aa18.91■□□□□ 0.62
VEGFA-208ENST00000417285 RYR2Q92736 4967 aa18.9■□□□□ 0.62
VEGFA-208ENST00000417285 C15orf62A8K5M9 175 aa18.9■□□□□ 0.62
VEGFA-208ENST00000417285 NOL3O60936 208 aaKnown RBP18.9■□□□□ 0.62
VEGFA-208ENST00000417285 CTSDP07339 412 aaPredicted RBP18.9■□□□□ 0.62
VEGFA-208ENST00000417285 CTSGP08311 255 aa18.9■□□□□ 0.62
VEGFA-208ENST00000417285 ADMP35318 185 aa18.9■□□□□ 0.62
VEGFA-208ENST00000417285 MFAP4P55083 255 aa18.9■□□□□ 0.62
VEGFA-208ENST00000417285 RELQ04864 619 aaPredicted RBP18.9■□□□□ 0.62
VEGFA-208ENST00000417285 IZUMO4Q1ZYL8 232 aa18.9■□□□□ 0.62
VEGFA-208ENST00000417285 MARCH1Q8TCQ1 289 aa18.9■□□□□ 0.62
VEGFA-208ENST00000417285 C20orf24Q9BUV8 137 aa18.9■□□□□ 0.62
VEGFA-208ENST00000417285 DISC1C4P0D8 188 aa18.89■□□□□ 0.61
VEGFA-208ENST00000417285 I3L2K1 104 aa18.89■□□□□ 0.61
VEGFA-208ENST00000417285 CTDSPLO15194 276 aa18.89■□□□□ 0.61
VEGFA-208ENST00000417285 NUPL2O15504 423 aaKnown RBP18.89■□□□□ 0.61
VEGFA-208ENST00000417285 FCGR2BP31994 310 aaPredicted RBP18.89■□□□□ 0.61
VEGFA-208ENST00000417285 SLC35G3Q8N808 338 aa18.89■□□□□ 0.61
VEGFA-208ENST00000417285 PDCD10Q9BUL8 212 aa18.89■□□□□ 0.61
VEGFA-208ENST00000417285 C14orf166Q9Y224 244 aaKnown RBP18.89■□□□□ 0.61
VEGFA-208ENST00000417285 MT-CO2P00403 227 aa18.88■□□□□ 0.61
VEGFA-208ENST00000417285 P0C879 139 aa18.88■□□□□ 0.61
VEGFA-208ENST00000417285 UCP1P25874 307 aa18.88■□□□□ 0.61
VEGFA-208ENST00000417285 SP6Q3SY56 376 aa18.88■□□□□ 0.61
VEGFA-208ENST00000417285 FAAP20Q6NZ36 180 aa18.88■□□□□ 0.61
VEGFA-208ENST00000417285 RNASE11Q8TAA1 199 aaKnown RBP18.88■□□□□ 0.61
VEGFA-208ENST00000417285 RRNAD1Q96FB5 475 aaKnown RBP18.88■□□□□ 0.61
VEGFA-208ENST00000417285 SACSQ9NZJ4 4579 aa18.88■□□□□ 0.61
VEGFA-208ENST00000417285 A0A0B4J293 547 aa18.87■□□□□ 0.61
VEGFA-208ENST00000417285 ST8SIA3O43173 380 aa18.87■□□□□ 0.61
VEGFA-208ENST00000417285 IFNA17P01571 189 aa18.87■□□□□ 0.61
VEGFA-208ENST00000417285 AKAIN1P0CW23 69 aa18.87■□□□□ 0.61
VEGFA-208ENST00000417285 SNCAP37840 140 aa18.87■□□□□ 0.61
VEGFA-208ENST00000417285 RPL5P46777 297 aaKnown RBP18.87■□□□□ 0.61
VEGFA-208ENST00000417285 SURF2Q15527 256 aaPredicted RBP18.87■□□□□ 0.61
VEGFA-208ENST00000417285 SPINK9Q5DT21 86 aa18.87■□□□□ 0.61
VEGFA-208ENST00000417285 PINX1Q96BK5 328 aaKnown RBP18.87■□□□□ 0.61
VEGFA-208ENST00000417285 OVOL2Q9BRP0 275 aa18.87■□□□□ 0.61
VEGFA-208ENST00000417285 C6orf62Q9GZU0 229 aaPredicted RBP18.87■□□□□ 0.61
VEGFA-208ENST00000417285 OR4C46A6NHA9 309 aa18.86■□□□□ 0.61
VEGFA-208ENST00000417285 INS-IGF2F8WCM5 200 aa18.86■□□□□ 0.61
VEGFA-208ENST00000417285 APOC4P55056 127 aa18.86■□□□□ 0.61
VEGFA-208ENST00000417285 SMPXQ9UHP9 88 aa18.86■□□□□ 0.61
VEGFA-208ENST00000417285 IGHV3OR16-8A0A075B7F1 116 aa18.85■□□□□ 0.61
VEGFA-208ENST00000417285 UBE2CO00762 179 aa18.85■□□□□ 0.61
VEGFA-208ENST00000417285 OR4C16Q8NGL9 310 aa18.85■□□□□ 0.61
VEGFA-208ENST00000417285 STARD9Q9P2P6 4700 aa18.85■□□□□ 0.61
VEGFA-208ENST00000417285 TEX13DA0A0J9YY54 714 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-208ENST00000417285 ZNF207O43670 478 aaKnown RBP18.84■□□□□ 0.61
VEGFA-208ENST00000417285 GNG7O60262 68 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 JTBO76095 146 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 YIF1AO95070 293 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 HOXA1P49639 335 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-208ENST00000417285 SUB1P53999 127 aaKnown RBP eCLIP18.84■□□□□ 0.61
VEGFA-208ENST00000417285 CMC4P56277 68 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-208ENST00000417285 Q6ZWC4 215 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 PRRT1Q99946 306 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 TMEM222Q9H0R3 208 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 NAA60Q9H7X0 242 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 ENY2Q9NPA8 101 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 RSL24D1Q9UHA3 163 aaKnown RBP18.84■□□□□ 0.61
VEGFA-208ENST00000417285 TP53TG1Q9Y2A0 90 aa18.84■□□□□ 0.61
VEGFA-208ENST00000417285 H3BMQ9 156 aa18.83■□□□□ 0.6
VEGFA-208ENST00000417285 IGHV3-48P01763 117 aa18.83■□□□□ 0.6
VEGFA-208ENST00000417285 OR5AC1P0C628 307 aa18.83■□□□□ 0.6
VEGFA-208ENST00000417285 FAM219AQ8IW50 185 aa18.83■□□□□ 0.6
VEGFA-208ENST00000417285 OR10C1Q96KK4 312 aa18.83■□□□□ 0.6
VEGFA-208ENST00000417285 RTBDNQ9BSG5 229 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-208ENST00000417285 NXF2Q9GZY0 626 aaKnown RBP18.83■□□□□ 0.6
VEGFA-208ENST00000417285 CORTO00230 105 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 GSTZ1O43708 216 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-208ENST00000417285 CDS2O95674 445 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 ETV6P41212 452 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 NPBWR1P48145 328 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 DHODHQ02127 395 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 WFDC3Q8IUB2 231 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 TMEM116Q8NCL8 245 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 DUSP18Q8NEJ0 188 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 RHPN1-AS1Q9BWJ2 59 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 SLIRPQ9GZT3 109 aaKnown RBP18.82■□□□□ 0.6
VEGFA-208ENST00000417285 UBQLN2Q9UHD9 624 aa18.82■□□□□ 0.6
VEGFA-208ENST00000417285 TRAV14DV4A0A0A6YYC5 116 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 KIR2DL5BA0A0G2JN68 375 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 KIR2DL5BA0A0G2JPC4 375 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 A0A0G2JRQ6 117 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 IGHV7-4-1A0A0J9YVY3 117 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 KIR2DL5AQ8N109 375 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 STPG3Q8N7X2 389 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 KIR2DL5BQ8NHK3 375 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 RBPMSQ93062 196 aaKnown RBP18.81■□□□□ 0.6
VEGFA-208ENST00000417285 GPR132Q9UNW8 380 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 LYSTQ99698 3801 aa18.81■□□□□ 0.6
VEGFA-208ENST00000417285 ANKRD20A5PA0PJZ0 165 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 CRYM-AS1A6NIL9 109 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 CHEK1O14757 476 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 SPRY2O43597 315 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 CD5P06127 495 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 BMI1P35226 326 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 ODF3L2Q3SX64 289 aa18.8■□□□□ 0.6
VEGFA-208ENST00000417285 OR51S1Q8NGJ8 323 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms