RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CMTM3Q96MX0 182 aa10.87□□□□□ -0.67
RPS28-201ENST00000417088 GNG7O60262 68 aa10.86□□□□□ -0.67
RPS28-201ENST00000417088 EIF4EP06730 217 aaKnown RBP10.86□□□□□ -0.67
RPS28-201ENST00000417088 S100GP29377 79 aa10.86□□□□□ -0.67
RPS28-201ENST00000417088 NANOS2P60321 138 aaKnown RBP10.86□□□□□ -0.67
RPS28-201ENST00000417088 HSPE1P61604 102 aaKnown RBP10.86□□□□□ -0.67
RPS28-201ENST00000417088 LGALS9CQ6DKI2 356 aa10.86□□□□□ -0.67
RPS28-201ENST00000417088 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
RPS28-201ENST00000417088 TCF24Q7RTU0 167 aa10.86□□□□□ -0.67
RPS28-201ENST00000417088 OR11H2Q8NH07 326 aa10.86□□□□□ -0.67
RPS28-201ENST00000417088 MRGPRFQ96AM1 343 aa10.86□□□□□ -0.67
RPS28-201ENST00000417088 PINX1Q96BK5 328 aaKnown RBP10.86□□□□□ -0.67
RPS28-201ENST00000417088 YIPF6Q96EC8 236 aa10.86□□□□□ -0.67
RPS28-201ENST00000417088 APOHP02749 345 aaPredicted RBP10.85□□□□□ -0.67
RPS28-201ENST00000417088 UCP3P55916 312 aa10.85□□□□□ -0.67
RPS28-201ENST00000417088 ERHP84090 104 aaKnown RBP10.85□□□□□ -0.67
RPS28-201ENST00000417088 IZUMO4Q1ZYL8 232 aa10.85□□□□□ -0.67
RPS28-201ENST00000417088 LILRB2Q8N423 598 aa10.85□□□□□ -0.67
RPS28-201ENST00000417088 C11orf45Q8TAV5 145 aa10.85□□□□□ -0.67
RPS28-201ENST00000417088 ST8SIA2Q92186 375 aa10.85□□□□□ -0.67
RPS28-201ENST00000417088 GINS3Q9BRX5 216 aa10.85□□□□□ -0.67
RPS28-201ENST00000417088 C11orf68Q9H3H3 251 aaKnown RBP10.85□□□□□ -0.67
RPS28-201ENST00000417088 VSIRQ9H7M9 311 aa10.85□□□□□ -0.67
RPS28-201ENST00000417088 VPS13DQ5THJ4 4388 aa10.84□□□□□ -0.67
RPS28-201ENST00000417088 CD5P06127 495 aa10.84□□□□□ -0.67
RPS28-201ENST00000417088 PAFAH1B2P68402 229 aa10.84□□□□□ -0.67
RPS28-201ENST00000417088 SPINK9Q5DT21 86 aa10.84□□□□□ -0.67
RPS28-201ENST00000417088 SNX29P2Q8IUI4 249 aa10.84□□□□□ -0.67
RPS28-201ENST00000417088 MFFQ9GZY8 342 aa10.84□□□□□ -0.67
RPS28-201ENST00000417088 SCPEP1Q9HB40 452 aa10.84□□□□□ -0.67
RPS28-201ENST00000417088 FBXL17Q9UF56 701 aa10.84□□□□□ -0.67
RPS28-201ENST00000417088 ST8SIA3O43173 380 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 DFFBO76075 338 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 CA1P00915 261 aaPredicted RBP10.83□□□□□ -0.68
RPS28-201ENST00000417088 RCVRNP35243 200 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 NPBWR1P48145 328 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 DEFB131AP59861 70 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 RBMS2Q15434 407 aaKnown RBP10.83□□□□□ -0.68
RPS28-201ENST00000417088 DUSP18Q8NEJ0 188 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 KRTAP17-1Q9BYP8 105 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 MS4A6AQ9H2W1 248 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 ZFAND3Q9H8U3 227 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 COMMD3Q9UBI1 195 aa10.83□□□□□ -0.68
RPS28-201ENST00000417088 PUS1Q9Y606 427 aaKnown RBP eCLIP10.83□□□□□ -0.68
RPS28-201ENST00000417088 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 SMIM31A0A1B0GVY4 71 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 DNASE2O00115 360 aaPredicted RBP10.82□□□□□ -0.68
RPS28-201ENST00000417088 DEFB4AO15263 64 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 TMEM50AO95807 157 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 IGKV1-5P01602 117 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 APOA1P02647 267 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 IFNA4P05014 189 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 TMEM187Q14656 261 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 LEMD1Q68G75 181 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 PVRIGQ6DKI7 326 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 ZNF600Q6ZNG1 722 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 FAM24BQ8N5W8 94 aa10.82□□□□□ -0.68
RPS28-201ENST00000417088 TRAV2A0A0B4J234 112 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 A0A0B4J293 547 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 A0A1B0GU03 582 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 M0QYG6 137 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 P0C879 139 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 SNCAP37840 140 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 RND3P61587 244 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 PRR20EP86478 221 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 PRR20CP86479 221 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 PRR20DP86480 221 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 PRR20BP86481 221 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 PRR20AP86496 221 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 TP53RKQ96S44 253 aa10.81□□□□□ -0.68
RPS28-201ENST00000417088 RNASE2P10153 161 aaKnown RBP10.8□□□□□ -0.68
RPS28-201ENST00000417088 ELK1P19419 428 aa10.8□□□□□ -0.68
RPS28-201ENST00000417088 PI3P19957 117 aa10.8□□□□□ -0.68
RPS28-201ENST00000417088 RPL11P62913 178 aaKnown RBP10.8□□□□□ -0.68
RPS28-201ENST00000417088 SLC35G3Q8N808 338 aa10.8□□□□□ -0.68
RPS28-201ENST00000417088 C2CD4CQ8TF44 421 aa10.8□□□□□ -0.68
RPS28-201ENST00000417088 MRPL36Q9P0J6 103 aaKnown RBP10.8□□□□□ -0.68
RPS28-201ENST00000417088 A0A087WXM4 84 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 HPGDSO60760 199 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 IFNA17P01571 189 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 GIG44P09565 113 aaPredicted RBP10.79□□□□□ -0.68
RPS28-201ENST00000417088 PGAM2P15259 253 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 PIGPP57054 158 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 NCS1P62166 190 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 MLANAQ16655 118 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 LHFPL1Q86WI0 220 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 Q8NAQ8 132 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 ZNF486Q96H40 463 aaPredicted RBP10.79□□□□□ -0.68
RPS28-201ENST00000417088 FNDC4Q9H6D8 234 aaPredicted RBP10.79□□□□□ -0.68
RPS28-201ENST00000417088 TMEM231Q9H6L2 316 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 RABAC1Q9UI14 185 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 DNAH6Q9C0G6 4158 aa10.79□□□□□ -0.68
RPS28-201ENST00000417088 CORTO00230 105 aa10.78□□□□□ -0.68
RPS28-201ENST00000417088 NPPCP23582 126 aa10.78□□□□□ -0.68
RPS28-201ENST00000417088 ETV6P41212 452 aa10.78□□□□□ -0.68
RPS28-201ENST00000417088 AKR1C2P52895 323 aa10.78□□□□□ -0.68
RPS28-201ENST00000417088 TCTAP57738 103 aa10.78□□□□□ -0.68
RPS28-201ENST00000417088 VBP1P61758 197 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms