RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 Q6ZRM9 215 aa11.87□□□□□ -0.51
ATG4B-203ENST00000400772 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
ATG4B-203ENST00000400772 RABL2AQ9UBK7 228 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-203ENST00000400772 RABL2BQ9UNT1 228 aa11.87□□□□□ -0.51
ATG4B-203ENST00000400772 SACSQ9NZJ4 4579 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 IGHV3OR16-8A0A075B7F1 116 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 ANKRD20A5PA0PJZ0 165 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 DISC1C4P0D8 188 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 B3GALNT1O75752 331 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 CDS2O95674 445 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 IGHV3-48P01763 117 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 OR5AC1P0C628 307 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 TNFSF8P32971 234 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 ETV6P41212 452 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 AKR1C2P52895 323 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 ERHP84090 104 aaKnown RBP11.86□□□□□ -0.51
ATG4B-203ENST00000400772 SURF2Q15527 256 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-203ENST00000400772 CASC10Q5T4H9 136 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 LHFPL5Q8TAF8 219 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 GLYATL2Q8WU03 294 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 TMEM222Q9H0R3 208 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 HIPK2Q9H2X6 1198 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 NAA60Q9H7X0 242 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 RETNQ9HD89 108 aa11.86□□□□□ -0.51
ATG4B-203ENST00000400772 DAZ1Q9NQZ3 744 aaKnown RBP11.86□□□□□ -0.51
ATG4B-203ENST00000400772 DYNC2H1Q8NCM8 4307 aaKnown RBP11.85□□□□□ -0.51
ATG4B-203ENST00000400772 RYR2Q92736 4967 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 TEX13DA0A0J9YY54 714 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-203ENST00000400772 K7EMT4 169 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 ZNF207O43670 478 aaKnown RBP11.85□□□□□ -0.51
ATG4B-203ENST00000400772 ATG12O94817 140 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 MFAP4P55083 255 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 RBPMS2Q6ZRY4 209 aaKnown RBP11.85□□□□□ -0.51
ATG4B-203ENST00000400772 SLC16A13Q7RTY0 426 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 OR51S1Q8NGJ8 323 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 OR52B4Q8NGK2 314 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 TXN2Q99757 166 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 C20orf24Q9BUV8 137 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 C14orf166Q9Y224 244 aaKnown RBP11.85□□□□□ -0.51
ATG4B-203ENST00000400772 CSMD3Q7Z407 3707 aa11.85□□□□□ -0.51
ATG4B-203ENST00000400772 CRYM-AS1A6NIL9 109 aa11.84□□□□□ -0.51
ATG4B-203ENST00000400772 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
ATG4B-203ENST00000400772 NOL3O60936 208 aaKnown RBP11.84□□□□□ -0.51
ATG4B-203ENST00000400772 IFNA17P01571 189 aa11.84□□□□□ -0.51
ATG4B-203ENST00000400772 AARDQ4LEZ3 155 aa11.84□□□□□ -0.51
ATG4B-203ENST00000400772 SELENOHQ8IZQ5 122 aaKnown RBP11.84□□□□□ -0.51
ATG4B-203ENST00000400772 SLC35G3Q8N808 338 aa11.84□□□□□ -0.51
ATG4B-203ENST00000400772 MCFD2Q8NI22 146 aa11.84□□□□□ -0.51
ATG4B-203ENST00000400772 PINX1Q96BK5 328 aaKnown RBP11.84□□□□□ -0.51
ATG4B-203ENST00000400772 PRRT1Q99946 306 aa11.84□□□□□ -0.51
ATG4B-203ENST00000400772 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
ATG4B-203ENST00000400772 RSL24D1Q9UHA3 163 aaKnown RBP11.84□□□□□ -0.51
ATG4B-203ENST00000400772 FABP12A6NFH5 140 aa11.83□□□□□ -0.52
ATG4B-203ENST00000400772 TSPAN4O14817 238 aa11.83□□□□□ -0.52
ATG4B-203ENST00000400772 NUPL2O15504 423 aaKnown RBP11.83□□□□□ -0.52
ATG4B-203ENST00000400772 RNASE2P10153 161 aaKnown RBP11.83□□□□□ -0.52
ATG4B-203ENST00000400772 RELQ04864 619 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-203ENST00000400772 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
ATG4B-203ENST00000400772 TMEM230Q96A57 120 aa11.83□□□□□ -0.52
ATG4B-203ENST00000400772 RRNAD1Q96FB5 475 aaKnown RBP11.83□□□□□ -0.52
ATG4B-203ENST00000400772 OR10C1Q96KK4 312 aa11.83□□□□□ -0.52
ATG4B-203ENST00000400772 SPAG8Q99932 426 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-203ENST00000400772 NBEAL2Q6ZNJ1 2754 aa11.83□□□□□ -0.52
ATG4B-203ENST00000400772 SNCAP37840 140 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 DHODHQ02127 395 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 MLANAQ16655 118 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 BSXQ3C1V8 233 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 FAM219AQ8IW50 185 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 RBPMSQ93062 196 aaKnown RBP11.82□□□□□ -0.52
ATG4B-203ENST00000400772 GPR146Q96CH1 333 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 FAM110AQ9BQ89 295 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 PDCD10Q9BUL8 212 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 SMPXQ9UHP9 88 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
ATG4B-203ENST00000400772 IGHV7-4-1A0A0J9YVY3 117 aa11.81□□□□□ -0.52
ATG4B-203ENST00000400772 CHEK1O14757 476 aa11.81□□□□□ -0.52
ATG4B-203ENST00000400772 GNG7O60262 68 aa11.81□□□□□ -0.52
ATG4B-203ENST00000400772 LYL1P12980 280 aa11.81□□□□□ -0.52
ATG4B-203ENST00000400772 HOXA1P49639 335 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-203ENST00000400772 LAMTOR1Q6IAA8 161 aa11.81□□□□□ -0.52
ATG4B-203ENST00000400772 OR52E5Q8NH55 327 aa11.81□□□□□ -0.52
ATG4B-203ENST00000400772 RNASE11Q8TAA1 199 aaKnown RBP11.81□□□□□ -0.52
ATG4B-203ENST00000400772 RNF2Q99496 336 aa11.81□□□□□ -0.52
ATG4B-203ENST00000400772 FNDC4Q9H6D8 234 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-203ENST00000400772 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-203ENST00000400772 PRR13Q9NZ81 148 aa11.81□□□□□ -0.52
ATG4B-203ENST00000400772 MRPL36Q9P0J6 103 aaKnown RBP11.81□□□□□ -0.52
ATG4B-203ENST00000400772 LYSTQ99698 3801 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 YIF1AO95070 293 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 TMEM50AO95807 157 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 SPCS3P61009 180 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 TMEM187Q14656 261 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 TMEM268Q5VZI3 342 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 TOMM20LQ6UXN7 152 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 TMEM116Q8NCL8 245 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 DUSP18Q8NEJ0 188 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 GALNT14Q96FL9 552 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 RHPN1-AS1Q9BWJ2 59 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms