RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 DCCP43146 1447 aa0.62□□□□□ -2.31
RNU6-48P-201ENST00000384161 SETD5Q9C0A6 1442 aa0.62□□□□□ -2.31
RNU6-48P-201ENST00000384161 KIF13BQ9NQT8 1826 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 TPRP12270 2363 aaKnown RBP0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 C21orf140B9A014 251 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 TRAPPC2LH3BP13 241 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 SLC16A4O15374 487 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 COCHO43405 550 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 MARCKSL1P49006 195 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 ZNF80P51504 273 aaPredicted RBP0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 MAP3K7CLP57077 242 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 RPL18Q07020 188 aaKnown RBP0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 DMTNQ08495 405 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 MLLT11Q13015 90 aaPredicted RBP0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 RSU1Q15404 277 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 IBA57Q5T440 356 aaKnown RBP0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 LRRN1Q6UXK5 716 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 DEFB125Q8N687 156 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 C11orf40Q8WZ69 217 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 DIRAS2Q96HU8 199 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 ERMAPQ96PL5 475 aaPredicted RBP0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 UPF3BQ9BZI7 483 aaKnown RBP0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 OR8D2Q9GZM6 311 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 DRC3Q9H069 523 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 FGFR1OP2Q9NVK5 253 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 USE1Q9NZ43 259 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 OR5AC2Q9NZP5 309 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 BAIAP2Q9UQB8 552 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 BRCA2P51587 3418 aa0.61□□□□□ -2.31
RNU6-48P-201ENST00000384161 KDM6BO15054 1643 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 TNRC6BQ9UPQ9 1833 aaKnown RBP0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 MAP1AP78559 2803 aaPredicted RBP0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 LINC00854A0A1B0GVQ3 168 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 GGT3PA6NGU5 568 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 M0QZ92 97 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 GEMIN2O14893 280 aaKnown RBP0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 PMP2P02689 132 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 SHBGP04278 402 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 REG1AP05451 166 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 COX5BP10606 129 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 HLA-DMBP28068 263 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 MAGEA2P43356 314 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 STX5Q13190 355 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 ZNF345Q14585 488 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 CLVS2Q5SYC1 327 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 C1orf195Q5TG92 126 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 SYPL2Q5VXT5 272 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 FAM151BQ6UXP7 276 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 REG4Q9BYZ8 158 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 TRABDQ9H4I3 376 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 PAQR5Q9NXK6 330 aaPredicted RBP0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 IL36BQ9NZH7 164 aa0.6□□□□□ -2.31
RNU6-48P-201ENST00000384161 WDR87Q6ZQQ6 2873 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 HMGXB3Q12766 1538 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 KIF24Q5T7B8 1368 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 C9orf84Q5VXU9 1444 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 FABP5P3A8MUU1 101 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 LRRN3E7EW58 273 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 CXCR6O00574 342 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 PRM2P04554 102 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 KRT7P08729 469 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 FAM228BP0C875 321 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 UBBP0CG47 229 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 BLVRAP53004 296 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 NAA20P61599 178 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 CCL20P78556 96 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 IFITM2Q01629 132 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 PRB3Q04118 309 aaPredicted RBP0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 TEX36Q5VZQ5 186 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 AAED1Q7RTV5 226 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 TMEM156Q8N614 296 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 ZNF565Q8N9K5 539 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 C15orf53Q8NAA6 179 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 OR4C6Q8NH72 309 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 CNBD2Q96M20 576 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 EFCAB1Q9HAE3 211 aa0.59□□□□□ -2.31
RNU6-48P-201ENST00000384161 LAMB4A4D0S4 1761 aa0.59□□□□□ -2.32
RNU6-48P-201ENST00000384161 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
RNU6-48P-201ENST00000384161 EML6Q6ZMW3 1958 aa0.59□□□□□ -2.32
RNU6-48P-201ENST00000384161 MAP3K5Q99683 1374 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 TRAV14DV4A0A0A6YYC5 116 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 IGKV1-9A0A0C4DH69 117 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 ACOX3O15254 700 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 RNASE3P12724 160 aaKnown RBP0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 RPS4Y1P22090 263 aaKnown RBP0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 CASQ1P31415 396 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 MAP2K4P45985 399 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 AP2S1P53680 142 aaPredicted RBP0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 RAB5BP61020 215 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 CTAG1AP78358 180 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 GRK1Q15835 563 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 COQ5Q5HYK3 327 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 DEFB128Q7Z7B8 93 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 LINC00471Q8N535 108 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 ZNF439Q8NDP4 499 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 OR4D11Q8NGI4 311 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 MCFD2Q8NI22 146 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 RASSF5Q8WWW0 418 aa0.58□□□□□ -2.32
RNU6-48P-201ENST00000384161 RAB8BQ92930 207 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms