RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 UBAC2Q8NBM4 344 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 OR13C8Q8NGS7 320 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 ZFAND1Q8TCF1 268 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 OVOL2Q9BRP0 275 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 GGTLC1Q9BX51 225 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 NXF2Q9GZY0 626 aaKnown RBP10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 SMPXQ9UHP9 88 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 LOC102724200A0A096LPH7 203 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 A0A0G2JRQ6 117 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 ST8SIA3O43173 380 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 RAB3DO95716 219 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 CTSDP07339 412 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 PPP5CP53041 499 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 MRPS10P82664 201 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 ERHP84090 104 aaKnown RBP10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 RELQ04864 619 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 SP6Q3SY56 376 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 MARCH1Q8TCQ1 289 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 DYNC2LI1Q8TCX1 351 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 SMIM4Q8WVI0 70 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 MISP3Q96FF7 219 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 RTBDNQ9BSG5 229 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 C20orf24Q9BUV8 137 aa10.15□□□□□ -0.78
TNFRSF1A-202ENST00000366159 IGHV7-4-1A0A0J9YVY3 117 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CHEK1O14757 476 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CTDSPLO15194 276 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 NUPL2O15504 423 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 ZNF207O43670 478 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 B3GALNT1O75752 331 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CDS2O95674 445 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 IGHV3-48P01763 117 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 FAM90A2PQ658T7 463 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 LAMTOR1Q6IAA8 161 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 Q6ZRM9 215 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 WFDC3Q8IUB2 231 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RNF2Q99496 336 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 ALMS1Q8TCU4 4167 aa10.14□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RGS5O15539 181 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 ATG12O94817 140 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TMBIM6P55061 237 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SURF2Q15527 256 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 BSXQ3C1V8 233 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SPINK9Q5DT21 86 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 FAAP20Q6NZ36 180 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CCDC71LQ8N9Z2 235 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 IL17DQ8TAD2 202 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 LHFPL5Q8TAF8 219 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 GLYATL2Q8WU03 294 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RAB2BQ8WUD1 216 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SOSTQ9BQB4 213 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 BCL7BQ9BQE9 202 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RHPN1-AS1Q9BWJ2 59 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TMEM222Q9H0R3 208 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CCDC59Q9P031 241 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 COPZ2Q9P299 210 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 GPR132Q9UNW8 380 aa10.13□□□□□ -0.79
TNFRSF1A-202ENST00000366159 ETV6P41212 452 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 AKR1C2P52895 323 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 MEF2DQ14814 521 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SCGB2B2Q4G0G5 96 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TOMM20LQ6UXN7 152 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 Q6ZWC4 215 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 CLVS1Q8IUQ0 354 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TMEM116Q8NCL8 245 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RABL2AQ9UBK7 228 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RABL2BQ9UNT1 228 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TP53TG1Q9Y2A0 90 aa10.12□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TRAV14DV4A0A0A6YYC5 116 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 KIR2DL5BA0A0G2JN68 375 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 KIR2DL5BA0A0G2JPC4 375 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TEX13DA0A0J9YY54 714 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 OR4C46A6NHA9 309 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 GSTZ1O43708 216 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 GNG7O60262 68 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TMEM50AO95807 157 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 IFNA17P01571 189 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SNCAP37840 140 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 RPL5P46777 297 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 NPBWR1P48145 328 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 TRIM16LQ309B1 348 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 FAM219AQ8IW50 185 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 KIR2DL5AQ8N109 375 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 LILRB2Q8N423 598 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 DUSP18Q8NEJ0 188 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 OR4C16Q8NGL9 310 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 OR52E5Q8NH55 327 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 KIR2DL5BQ8NHK3 375 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 PINX1Q96BK5 328 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 SLIRPQ9GZT3 109 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 FNDC4Q9H6D8 234 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 VSIRQ9H7M9 311 aa10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 MRPL36Q9P0J6 103 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-202ENST00000366159 ANKRD20A5PA0PJZ0 165 aa10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 UBE2CO00762 179 aa10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 APOHP02749 345 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 OR5AC1P0C628 307 aa10.1□□□□□ -0.79
TNFRSF1A-202ENST00000366159 AKAIN1P0CW23 69 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms