RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.46
TUBB4B-201ENST00000340384 Q8N7P7 452 aa12.21□□□□□ -0.46
TUBB4B-201ENST00000340384 SLC35E1Q96K37 410 aa12.21□□□□□ -0.46
TUBB4B-201ENST00000340384 LY6LH3BQJ8 138 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 MT-CO2P00403 227 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 SNRNP70P08621 437 aaKnown RBP12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 ATF4P18848 351 aaPredicted RBP12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 CEBPGP53567 150 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 B2MP61769 119 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 ARF6P62330 175 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 LCN2P80188 198 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 TPTE2P1Q5T6R2 138 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 TMEM88Q6PEY1 159 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 SLC35E3Q7Z769 313 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 CYB561D1Q8N8Q1 229 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 NANPQ8TBE9 248 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 C17orf50Q8WW18 174 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 TVP23CQ96ET8 276 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 DPM3Q9P2X0 92 aa12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 POLR3KQ9Y2Y1 108 aaPredicted RBP12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 PUS1Q9Y606 427 aaKnown RBP eCLIP12.2□□□□□ -0.46
TUBB4B-201ENST00000340384 C7orf77A4D0Y5 90 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 PAX6P26367 422 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 RHOBP62745 196 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 MEF2BQ02080 365 aaPredicted RBP12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 CD69Q07108 199 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 PNRC1Q12796 327 aaPredicted RBP12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 AKIRIN2Q53H80 203 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 CBLN2Q8IUK8 224 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 C15orf54Q8N8G6 183 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 TUBA4BQ9H853 241 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 LPAR2Q9HBW0 351 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 OOSP1A8MZH6 123 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 B4DEV8 164 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 H3BQ15 152 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 PSG5Q15238 335 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 PRSS8Q16651 343 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 MIC13Q5XKP0 118 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 ETFRF1Q6IPR1 90 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 CCDC144NLQ6NUI1 221 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 IQCF2Q8IXL9 164 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 C19orf24Q9BVV8 132 aa12.19□□□□□ -0.46
TUBB4B-201ENST00000340384 CREBBPQ92793 2442 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 IGHV3-72A0A0B4J1Y9 119 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 TMEM250H0YL14 139 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 YIF1AO95070 293 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 CXorf1O96002 111 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 CRYGBP07316 175 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 IGHV4-31P0DP07 118 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 COMPP49747 757 aaPredicted RBP12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 SLC16A13Q7RTY0 426 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 STPG3Q8N7X2 389 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 OR10W1Q8NGF6 305 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 TXNDC17Q9BRA2 123 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 SIGLEC9Q9Y336 463 aa12.18□□□□□ -0.46
TUBB4B-201ENST00000340384 ACANP16112 2415 aa12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 A0A1W2PPI3 338 aa12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 ODF3BA8MYP8 253 aa12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 CORTO00230 105 aa12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 KRTAP1-1Q07627 177 aa12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 TNXAQ16473 311 aa12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 SRSF8Q9BRL6 282 aaKnown RBP12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 SIRT7Q9NRC8 400 aa12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 METTL1Q9UBP6 276 aaKnown RBP12.17□□□□□ -0.46
TUBB4B-201ENST00000340384 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 PRR20EP86478 221 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 PRR20CP86479 221 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 PRR20DP86480 221 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 PRR20BP86481 221 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 PRR20AP86496 221 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 MINOS1Q5TGZ0 78 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 PPP1R27Q86WC6 154 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 ZNF114Q8NC26 417 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 SSMEM1Q8WWF3 244 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 C22orf15Q8WYQ4 148 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 C20orf24Q9BUV8 137 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 PRELID1Q9Y255 219 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 MINOS1-NBL1R4GNA1 71 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 HIVEP1P15822 2718 aa12.16□□□□□ -0.46
TUBB4B-201ENST00000340384 A0A087WWC5 75 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 IGHV2-70DA0A0C4DH43 119 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 SMAD7O15105 426 aaKnown RBP12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 FOXH1O75593 365 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 FBP1P09467 338 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 STAG3L2P0CL84 134 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 STAG3L3P0CL85 134 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 DLX1P56177 255 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 WT1-ASQ06250 92 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 GAMTQ14353 236 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 PLGLAQ15195 96 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 FAM90A2PQ658T7 463 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 SPNS3Q6ZMD2 512 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 RNF2Q99496 336 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 SLC45A2Q9UMX9 530 aa12.15□□□□□ -0.46
TUBB4B-201ENST00000340384 CGB1A6NKQ9 187 aa12.15□□□□□ -0.47
TUBB4B-201ENST00000340384 B4DSR2 109 aa12.15□□□□□ -0.47
TUBB4B-201ENST00000340384 PDE6DO43924 150 aa12.15□□□□□ -0.47
TUBB4B-201ENST00000340384 VENTXO95231 258 aa12.15□□□□□ -0.47
TUBB4B-201ENST00000340384 MSMBP08118 114 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms