RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ANKRD34BA5PLL1 514 aa9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 CCSO14618 274 aa9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 RNASE2P10153 161 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 MFAP2P55001 183 aa9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 CYCSP99999 105 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 EXOSC2Q13868 293 aaKnown RBP9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 OXA1LQ15070 435 aa9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 OR4D5Q8NGN0 318 aa9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 RAX2Q96IS3 184 aa9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 MAGT1Q9H0U3 335 aa9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 STAB1Q9NY15 2570 aa9.22□□□□□ -0.93
SPTLC1-202ENST00000337841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 C7orf66A4D0T2 115 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 LINC01619G3V211 115 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 GOSR2O14653 212 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 TSPAN15O95858 294 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 SCGB1D2O95969 90 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 OR8U8P0C7N1 319 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 ZP3P21754 424 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 MFAP4P55083 255 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 RAB11AP62491 216 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 DEFA5Q01523 94 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 ZNF616Q08AN1 781 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 BSXQ3C1V8 233 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 C2orf83Q53S99 150 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 C4orf48Q5BLP8 95 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 PRR31Q5SQ13 230 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 SLC24A4Q8NFF2 622 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 PINX1Q96BK5 328 aaKnown RBP9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 GAR1Q9NY12 217 aaKnown RBP9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 DMRT1Q9Y5R6 373 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 ALG5Q9Y673 324 aa9.21□□□□□ -0.94
SPTLC1-202ENST00000337841 TENM1Q9UKZ4 2725 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 RPS10-NUDT3A0A1W2PQS6 291 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 MT-CO2P00403 227 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 IFNA4P05014 189 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 CLEC3BP05452 202 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 IAPPP10997 89 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 NPY1RP25929 384 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 POLR2GP62487 172 aaKnown RBP eCLIP9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 DEFB136Q30KP8 78 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 PVRIGQ6DKI7 326 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 ETFRF1Q6IPR1 90 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 CLEC19AQ6UXS0 136 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 RNASEH2CQ8TDP1 164 aaKnown RBP9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 SCARB1Q8WTV0 552 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 DUX3Q96PT4 197 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 RAB40CQ96S21 281 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 ATP6V0BQ99437 205 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 TXN2Q99757 166 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 MED28Q9H204 178 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 C21orf62Q9NYP8 219 aa9.2□□□□□ -0.94
SPTLC1-202ENST00000337841 IGHV4OR15-8A0A075B7B6 117 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 A0A087WW49 117 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 IGHV3-21A0A0B4J1V1 117 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 MFSD2BA6NFX1 497 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 I3L2K1 104 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 K7EIM0 57 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 L7N2F9 121 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 GGCTO75223 188 aaKnown RBP9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 IGHV3-23P01764 117 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 MBPP02686 304 aaPredicted RBP9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 RLN2P04090 185 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 CD33P20138 364 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 PVALBP20472 110 aaPredicted RBP9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 VAMP2P63027 116 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 TREML4Q6UXN2 200 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 WFDC9Q8NEX5 89 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 ZNF502Q8TBZ5 544 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 SMIM8Q96KF7 97 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 PSENENQ9NZ42 101 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 MGAT4CQ9UBM8 478 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 PAIP2BQ9ULR5 123 aaKnown RBP9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 STRAPQ9Y3F4 350 aaKnown RBP9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 S4R3C0 116 aa9.19□□□□□ -0.94
SPTLC1-202ENST00000337841 SSSCA1O60232 199 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 SIX6O95475 246 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 SLC25A4P12235 298 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 ARL3P36405 182 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 OPRK1P41145 380 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 NPBWR1P48145 328 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 TAS2R30P59541 319 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 RPEL1Q2QD12 228 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 Q56UQ5 140 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 SPANXN5Q5MJ07 72 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 TET2Q6N021 2002 aaPredicted RBP9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 ACSM6Q6P461 480 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 ETV3LQ6ZN32 361 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 NMES1Q9C002 83 aa9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 LSM5Q9Y4Y9 91 aaKnown RBP9.18□□□□□ -0.94
SPTLC1-202ENST00000337841 SCGB2A1O75556 95 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 HOXD3P31249 432 aaPredicted RBP9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 FCGR2BP31994 310 aaPredicted RBP9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 GPX4P36969 197 aaPredicted RBP9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 IL15RAQ13261 267 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 FHL3Q13643 280 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 MLANAQ16655 118 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 FAM106AQ4KMX7 169 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 SPSB3Q6PJ21 355 aa9.17□□□□□ -0.94
SPTLC1-202ENST00000337841 LINC00482Q8N8I6 264 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms