RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ATRXP46100 2492 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 NBEAP1P0C6P0 100 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 NPY1RP25929 384 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
SYNE3-201ENST00000334258 RPL39P5Q59GN2 51 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 ABHD17BQ5VST6 288 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 Q6ZR03 302 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 C19orf35Q6ZS72 473 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 WDR31Q8NA23 367 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 C11orf52Q96A22 123 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 S1PR3Q99500 378 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 FAM173AQ9BQD7 235 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 SELENOKQ9Y6D0 94 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 POLEQ07864 2286 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 TMEM140Q9NV12 185 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 LY96Q9Y6Y9 160 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 IGHV2-70DA0A0C4DH43 119 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 M0R2Z0 102 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 VDAC2P45880 294 aaPredicted RBP11.33□□□□□ -0.6
SYNE3-201ENST00000334258 COX19Q49B96 90 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 TMEM164Q5U3C3 297 aa11.33□□□□□ -0.6
SYNE3-201ENST00000334258 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
SYNE3-201ENST00000334258 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.32□□□□□ -0.6
SYNE3-201ENST00000334258 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
SYNE3-201ENST00000334258 MFAP2P55001 183 aa11.32□□□□□ -0.6
SYNE3-201ENST00000334258 PMCHL1Q16048 86 aa11.32□□□□□ -0.6
SYNE3-201ENST00000334258 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
SYNE3-201ENST00000334258 PRR27Q6MZM9 219 aa11.32□□□□□ -0.6
SYNE3-201ENST00000334258 OSTCQ9NRP0 149 aa11.32□□□□□ -0.6
SYNE3-201ENST00000334258 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
SYNE3-201ENST00000334258 FZR1Q9UM11 496 aa11.32□□□□□ -0.6
SYNE3-201ENST00000334258 KALRNO60229 2985 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 MMP23AO75900 390 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 RELBQ01201 579 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 SAA2-SAA4A0A096LPE2 208 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 CAMPP49913 170 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 TNXAQ16473 311 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 PRR31Q5SQ13 230 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
SYNE3-201ENST00000334258 IGHV2OR16-5A0A0B4J2B6 119 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 SAP30O75446 220 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 TOMM40O96008 361 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 AREGP15514 252 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 SLAQ13239 276 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 NABP2Q9BQ15 211 aa11.31□□□□□ -0.6
SYNE3-201ENST00000334258 PROP1O75360 226 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 TMEM95Q3KNT9 176 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 TMEM251Q8N6I4 163 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 Q8TCH9 128 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 TECRQ9NZ01 308 aaKnown RBP11.3□□□□□ -0.6
SYNE3-201ENST00000334258 MRPS16Q9Y3D3 137 aaKnown RBP11.3□□□□□ -0.6
SYNE3-201ENST00000334258 PCSK5Q92824 1860 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 TRAV9-2A0A087WT02 112 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 GNG7O60262 68 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 ADH4P08319 380 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 TNFSF4P23510 183 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 MPV17P39210 176 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 GPR6P46095 362 aaPredicted RBP11.3□□□□□ -0.6
SYNE3-201ENST00000334258 SELENOVP59797 346 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 ZNF766Q5HY98 468 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 ACP7Q6ZNF0 438 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 GP6Q9HCN6 339 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
SYNE3-201ENST00000334258 ISLRO14498 428 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 FABP6P51161 128 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 TMPRSS3P57727 454 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 VWA1Q6PCB0 445 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 C18orf32Q8TCD1 76 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 C1orf159Q96HA4 380 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 TLN1Q9Y490 2541 aaKnown RBP11.29□□□□□ -0.6
SYNE3-201ENST00000334258 HCFC1P51610 2035 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 PRSS46E5RG02 174 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 NKX2-8O15522 239 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 TIMM8AO60220 97 aaPredicted RBP11.29□□□□□ -0.6
SYNE3-201ENST00000334258 LYZL6O75951 148 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 WISP2O76076 250 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 KLF14Q8TD94 323 aaPredicted RBP11.29□□□□□ -0.6
SYNE3-201ENST00000334258 LEAP2Q969E1 77 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 MYOD1P15172 320 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 IGLL1P15814 213 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
SYNE3-201ENST00000334258 GABRA6Q16445 453 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 SMIM21Q3B7S5 101 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 MOB3BQ86TA1 216 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 FAM168AQ92567 244 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 TRIB1Q96RU8 372 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 TNCP24821 2201 aa11.29□□□□□ -0.6
SYNE3-201ENST00000334258 ZNF891A8MT65 544 aaPredicted RBP11.28□□□□□ -0.6
SYNE3-201ENST00000334258 UBE2G1P62253 170 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 ARG2P78540 354 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
SYNE3-201ENST00000334258 DEFB127Q9H1M4 99 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 ARL2-SNX15V9GYD0 113 aa11.28□□□□□ -0.6
SYNE3-201ENST00000334258 IZUMO1RA6ND01 250 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms