RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PVRIGQ6DKI7 326 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 TMEM65Q6PI78 240 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 MISP3Q96FF7 219 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 ST6GAL2Q96JF0 529 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 SLA2Q9H6Q3 261 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 KLK9Q9UKQ9 250 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 RLN2P04090 185 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 PET100P0DJ07 73 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 PRSS54Q6PEW0 395 aa21.12■□□□□ 0.97
HDAC3-201ENST00000305264 STRAPQ9Y3F4 350 aaKnown RBP21.12■□□□□ 0.97
HDAC3-201ENST00000305264 TSC22D2O75157 780 aa21.11■□□□□ 0.97
HDAC3-201ENST00000305264 CCNKO75909 580 aa21.11■□□□□ 0.97
HDAC3-201ENST00000305264 RPL23AP62750 156 aaKnown RBP21.11■□□□□ 0.97
HDAC3-201ENST00000305264 OR1L6Q8NGR2 347 aa21.11■□□□□ 0.97
HDAC3-201ENST00000305264 NDUFB8O95169 186 aa21.1■□□□□ 0.97
HDAC3-201ENST00000305264 CAV2P51636 162 aa21.1■□□□□ 0.97
HDAC3-201ENST00000305264 MYOZ3Q8TDC0 251 aa21.1■□□□□ 0.97
HDAC3-201ENST00000305264 FBXL7Q9UJT9 491 aa21.1■□□□□ 0.97
HDAC3-201ENST00000305264 E5RGE8 158 aa21.1■□□□□ 0.97
HDAC3-201ENST00000305264 HIST1H1BP16401 226 aaKnown RBP21.1■□□□□ 0.97
HDAC3-201ENST00000305264 KIAA0141Q14154 515 aaPredicted RBP21.1■□□□□ 0.97
HDAC3-201ENST00000305264 NECAP1Q8NC96 275 aa21.1■□□□□ 0.97
HDAC3-201ENST00000305264 PINX1Q96BK5 328 aaKnown RBP21.1■□□□□ 0.97
HDAC3-201ENST00000305264 LYRM2Q9NU23 88 aaPredicted RBP21.1■□□□□ 0.97
HDAC3-201ENST00000305264 IGHV3-21A0A0B4J1V1 117 aa21.09■□□□□ 0.97
HDAC3-201ENST00000305264 RPP30P78346 268 aaKnown RBP21.09■□□□□ 0.97
HDAC3-201ENST00000305264 TMEM14EPQ6UXP3 125 aa21.09■□□□□ 0.97
HDAC3-201ENST00000305264 AKAP14Q86UN6 197 aa21.09■□□□□ 0.97
HDAC3-201ENST00000305264 FAM24AA6NFZ4 105 aa21.08■□□□□ 0.97
HDAC3-201ENST00000305264 CYB5BO43169 146 aa21.08■□□□□ 0.97
HDAC3-201ENST00000305264 OR8U8P0C7N1 319 aa21.08■□□□□ 0.97
HDAC3-201ENST00000305264 FGL1Q08830 312 aa21.08■□□□□ 0.97
HDAC3-201ENST00000305264 C15orf32Q32M92 178 aa21.08■□□□□ 0.97
HDAC3-201ENST00000305264 S4R3C0 116 aa21.08■□□□□ 0.97
HDAC3-201ENST00000305264 STAB1Q9NY15 2570 aa21.08■□□□□ 0.97
HDAC3-201ENST00000305264 FAM223BA6NKX1 122 aa21.08■□□□□ 0.96
HDAC3-201ENST00000305264 K7EIM0 57 aa21.08■□□□□ 0.96
HDAC3-201ENST00000305264 IFNA4P05014 189 aa21.08■□□□□ 0.96
HDAC3-201ENST00000305264 METTL15P1P0C7V9 234 aa21.08■□□□□ 0.96
HDAC3-201ENST00000305264 KHDC1LQ5JSQ8 128 aa21.08■□□□□ 0.96
HDAC3-201ENST00000305264 FAM223AQ8IWN6 122 aa21.08■□□□□ 0.96
HDAC3-201ENST00000305264 THAP6Q8TBB0 222 aa21.08■□□□□ 0.96
HDAC3-201ENST00000305264 CITED2Q99967 270 aaPredicted RBP21.08■□□□□ 0.96
HDAC3-201ENST00000305264 MFSD2BA6NFX1 497 aa21.07■□□□□ 0.96
HDAC3-201ENST00000305264 LYL1P12980 280 aa21.07■□□□□ 0.96
HDAC3-201ENST00000305264 ATP5IP56385 69 aaPredicted RBP21.07■□□□□ 0.96
HDAC3-201ENST00000305264 CD300CQ08708 224 aa21.07■□□□□ 0.96
HDAC3-201ENST00000305264 FNDC4Q9H6D8 234 aaPredicted RBP21.07■□□□□ 0.96
HDAC3-201ENST00000305264 THYN1Q9P016 225 aa21.07■□□□□ 0.96
HDAC3-201ENST00000305264 IGSF23A1L1A6 192 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 I3L2K1 104 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 RAB11AP62491 216 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 ETV3LQ6ZN32 361 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 NOXA1Q86UR1 476 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 ZNF491Q8N8L2 437 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 DCUN1D4Q92564 292 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 CORTO00230 105 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 MT-CO2P00403 227 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 IGHV3-48P01763 117 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 OPRK1P41145 380 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 P2RY1P47900 373 aa21.06■□□□□ 0.96
HDAC3-201ENST00000305264 RNASEH2CQ8TDP1 164 aaKnown RBP21.06■□□□□ 0.96
HDAC3-201ENST00000305264 TCRBV4S1A1TA0A5B7 111 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 PMS2P5A8MQ11 134 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 IGHV3-11P01762 117 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 MLANAQ16655 118 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 TMEM252Q8N6L7 170 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 PRSS46E5RG02 174 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 IGHV3-23P01764 117 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 ATP5G2Q06055 141 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 OR8G2PQ6IF36 304 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 C18orf65Q6ZTR6 163 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 HAPLN4Q86UW8 402 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 USMG5Q96IX5 58 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 GNB4Q9HAV0 340 aa21.05■□□□□ 0.96
HDAC3-201ENST00000305264 EXOSC2Q13868 293 aaKnown RBP21.04■□□□□ 0.96
HDAC3-201ENST00000305264 TCTE3Q8IZS6 198 aa21.04■□□□□ 0.96
HDAC3-201ENST00000305264 SCARB1Q8WTV0 552 aa21.04■□□□□ 0.96
HDAC3-201ENST00000305264 OR5B12Q96R08 314 aa21.04■□□□□ 0.96
HDAC3-201ENST00000305264 MDFIQ99750 246 aa21.04■□□□□ 0.96
HDAC3-201ENST00000305264 FXYD6-FXYD2A0A087WZ82 144 aa21.03■□□□□ 0.96
HDAC3-201ENST00000305264 CST7O76096 145 aa21.03■□□□□ 0.96
HDAC3-201ENST00000305264 A0A0G2JLM5 398 aa21.03■□□□□ 0.96
HDAC3-201ENST00000305264 SLC25A4P12235 298 aa21.03■□□□□ 0.96
HDAC3-201ENST00000305264 ARL16Q0P5N6 197 aa21.03■□□□□ 0.96
HDAC3-201ENST00000305264 UBE2E2Q96LR5 201 aa21.03■□□□□ 0.96
HDAC3-201ENST00000305264 CITED1Q99966 193 aa21.02■□□□□ 0.96
HDAC3-201ENST00000305264 NEURL2Q9BR09 285 aa21.02■□□□□ 0.96
HDAC3-201ENST00000305264 MRPL36Q9P0J6 103 aaKnown RBP21.02■□□□□ 0.96
HDAC3-201ENST00000305264 A0A1W2PRX2 142 aa21.01■□□□□ 0.95
HDAC3-201ENST00000305264 EWSR1Q01844 656 aaKnown RBP eCLIP21.01■□□□□ 0.95
HDAC3-201ENST00000305264 CD69Q07108 199 aa21.01■□□□□ 0.95
HDAC3-201ENST00000305264 VN1R17PQ8TDU5 208 aa21.01■□□□□ 0.95
HDAC3-201ENST00000305264 CCDC140Q96MF4 163 aa21.01■□□□□ 0.95
HDAC3-201ENST00000305264 TSSC4Q9Y5U2 329 aaPredicted RBP21.01■□□□□ 0.95
HDAC3-201ENST00000305264 CDX1P47902 265 aaPredicted RBP21.01■□□□□ 0.95
HDAC3-201ENST00000305264 SULT1A1P50225 295 aa21.01■□□□□ 0.95
HDAC3-201ENST00000305264 C12orf54Q6X4T0 127 aa21.01■□□□□ 0.95
HDAC3-201ENST00000305264 STX12Q86Y82 276 aa21.01■□□□□ 0.95
HDAC3-201ENST00000305264 TMEM217Q8N7C4 229 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 266.6 ms