RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SLC16A13Q7RTY0 426 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 C15orf54Q8N8G6 183 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 NECAP1Q8NC96 275 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 PARLQ9H300 379 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 C2orf83Q53S99 150 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 NPIPB3Q92617 1050 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 SSX3Q99909 188 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 ZFHX3Q15911 3703 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 AKR1D1P51857 326 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 CD69Q07108 199 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 PSG5Q15238 335 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 MMDQ15546 238 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 C8orf31Q8N9H6 132 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 MRPL36Q9P0J6 103 aaKnown RBP14.41□□□□□ -0.1
CAPN1-201ENST00000279247 PGPEP1LA6NFU8 196 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 HTR1DP28221 377 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 RUSC1-AS1Q66K80 236 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 FAM71F2Q6NXP2 309 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 DTX2Q86UW9 622 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 ZNF843Q8N446 348 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 SLC35E1Q96K37 410 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 FAM103A1Q9BTL3 118 aaKnown RBP14.41□□□□□ -0.1
CAPN1-201ENST00000279247 NBPF19A0A087WUL8 3843 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 RPL27AP46776 148 aaKnown RBP14.41□□□□□ -0.1
CAPN1-201ENST00000279247 LGALS7P47929 136 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 TMEM144Q7Z5S9 345 aa14.41□□□□□ -0.1
CAPN1-201ENST00000279247 A0A1W2PN81 502 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 OR10J4P0C629 311 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 CHRNA7P36544 502 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 RPS10P46783 165 aaKnown RBP14.4□□□□□ -0.1
CAPN1-201ENST00000279247 BPESC1Q9GZL8 116 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 SIGLEC9Q9Y336 463 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 ABCA12Q86UK0 2595 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 NDUFB4O95168 129 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 CNIH1O95406 144 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 ZNF90Q03938 601 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 PRSS8Q16651 343 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 FBLN7Q53RD9 439 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 MANBALQ9NQG1 85 aa14.4□□□□□ -0.1
CAPN1-201ENST00000279247 A1L4Q6 167 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 SEC14L6B5MCN3 397 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 OR7C2O60412 319 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 MOSP00540 346 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 MRGPRG-AS1Q2M3A8 158 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 RNF212Q495C1 297 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 UHRF2Q96PU4 802 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 GSX1Q9H4S2 264 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-201ENST00000279247 TGIF2-C20orf24A0A0A6YYL0 155 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 MT-ND4LP03901 98 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 LINC00869P0C866 280 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 RAB5AP20339 215 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 NPPCP23582 126 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 RND2P52198 227 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 RHOBP62745 196 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 PPP1R27Q86WC6 154 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 BEND2Q8NDZ0 799 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 TNFRSF14Q92956 283 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 SDF2L1Q9HCN8 221 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 VMO1Q7Z5L0 202 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 SLC45A2Q9UMX9 530 aa14.39□□□□□ -0.11
CAPN1-201ENST00000279247 AMMECR1Q9Y4X0 333 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-201ENST00000279247 UBR5O95071 2799 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-201ENST00000279247 USP9YO00507 2555 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-201ENST00000279247 STAG3L2P0CL84 134 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 STAG3L3P0CL85 134 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 RPL29P47914 159 aaKnown RBP14.38□□□□□ -0.11
CAPN1-201ENST00000279247 TMEM241Q24JQ0 296 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 MMD2Q8IY49 270 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 LY6G5BQ8NDX9 201 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 Q8WTZ3 238 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 DPM3Q9P2X0 92 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 FBN2P35556 2912 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 CXCL1P09341 107 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 C8orf46Q8TAG6 207 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 KCNIP2Q9NS61 270 aa14.38□□□□□ -0.11
CAPN1-201ENST00000279247 TRAV5A0A0B4J249 113 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 A6NNC1 897 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 C1orf196B1AJZ1 125 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 CXorf1O96002 111 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 RPL35P42766 123 aaKnown RBP14.37□□□□□ -0.11
CAPN1-201ENST00000279247 SUB1P53999 127 aaKnown RBP eCLIP14.37□□□□□ -0.116e-7■□□□□ 8.8
CAPN1-201ENST00000279247 PRR20EP86478 221 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 PRR20CP86479 221 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 PRR20DP86480 221 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 PRR20BP86481 221 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 PRR20AP86496 221 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 TPTE2P1Q5T6R2 138 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 YTHDF2Q9Y5A9 579 aaKnown RBP14.37□□□□□ -0.11
CAPN1-201ENST00000279247 TENM4Q6N022 2769 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 IGLC7A0M8Q6 106 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 GCHFRP30047 84 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 FLI1Q01543 452 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-201ENST00000279247 HABP2Q14520 560 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-201ENST00000279247 BSXQ3C1V8 233 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 MORN5Q5VZ52 161 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 OR4A5Q8NH83 315 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 SLC25A33Q9BSK2 321 aa14.37□□□□□ -0.11
CAPN1-201ENST00000279247 SCO2A0A1W2PP80 73 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 MFAP2P55001 183 aa14.36□□□□□ -0.11
CAPN1-201ENST00000279247 S4R3C0 116 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms