RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 A0A1W2PRM7 423 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 FCN1O00602 326 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 PAGE4O60829 102 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 ARL14EPLP0DKL9 152 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 MFAP2P55001 183 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 IQCF2Q8IXL9 164 aa13.29□□□□□ -0.28
CCDC40-201ENST00000269318 MRPL41Q8IXM3 137 aaKnown RBP13.29□□□□□ -0.28
CCDC40-201ENST00000269318 KLF2Q9Y5W3 355 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-201ENST00000269318 COL12A1Q99715 3063 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 TMEM250H0YL14 139 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 CXorf1O96002 111 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 RHOBP62745 196 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 MINOS1Q5TGZ0 78 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 SPATA31B1PQ5VZV4 182 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 SPNS3Q6ZMD2 512 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 DYNAPQ8N1N2 210 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 SPOCK3Q9BQ16 436 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 MINOS1-NBL1R4GNA1 71 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 NAV3Q8IVL0 2385 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 FLNCQ14315 2725 aa13.28□□□□□ -0.28
CCDC40-201ENST00000269318 NDUFA3O95167 84 aa13.27□□□□□ -0.28
CCDC40-201ENST00000269318 MOSP00540 346 aa13.27□□□□□ -0.28
CCDC40-201ENST00000269318 PDLIM4P50479 330 aa13.27□□□□□ -0.28
CCDC40-201ENST00000269318 GNB1P62873 340 aa13.27□□□□□ -0.28
CCDC40-201ENST00000269318 FBLN7Q53RD9 439 aa13.27□□□□□ -0.28
CCDC40-201ENST00000269318 C15orf54Q8N8G6 183 aa13.27□□□□□ -0.28
CCDC40-201ENST00000269318 NPBQ8NG41 125 aa13.27□□□□□ -0.28
CCDC40-201ENST00000269318 ACY3Q96HD9 319 aa13.27□□□□□ -0.28
CCDC40-201ENST00000269318 MRPL36Q9P0J6 103 aaKnown RBP13.27□□□□□ -0.28
CCDC40-201ENST00000269318 PLXNB1O43157 2135 aa13.27□□□□□ -0.29
CCDC40-201ENST00000269318 OOSP1A8MZH6 123 aa13.27□□□□□ -0.29
CCDC40-201ENST00000269318 CRYGCP07315 174 aa13.27□□□□□ -0.29
CCDC40-201ENST00000269318 GATA2P23769 480 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-201ENST00000269318 MMDQ15546 238 aa13.27□□□□□ -0.29
CCDC40-201ENST00000269318 SRSF12Q8WXF0 261 aaKnown RBP13.27□□□□□ -0.29
CCDC40-201ENST00000269318 EAF1Q96JC9 268 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-201ENST00000269318 TBX15Q96SF7 602 aa13.27□□□□□ -0.29
CCDC40-201ENST00000269318 CCL19Q99731 98 aa13.27□□□□□ -0.29
CCDC40-201ENST00000269318 NBR2O15453 112 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 SSX2Q16385 188 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 CCDC144NLQ6NUI1 221 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 C19orf35Q6ZS72 473 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 THAP8Q8NA92 274 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 OR1P1Q8NH06 330 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 OR4F5Q8NH21 305 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 C17orf50Q8WW18 174 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 OR4F4Q96R69 305 aa13.26□□□□□ -0.29
CCDC40-201ENST00000269318 USP9XQ93008 2570 aaPredicted RBP13.26□□□□□ -0.29
CCDC40-201ENST00000269318 ASH1LQ9NR48 2969 aaKnown RBP13.26□□□□□ -0.29
CCDC40-201ENST00000269318 IGKV1D-37A0A075B6S9 117 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 A0A087WWC5 75 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 C11orf94C9JXX5 98 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 TOX4O94842 621 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 APELAP0DMC3 54 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 CD24P25063 80 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 PNRC1Q12796 327 aaPredicted RBP13.25□□□□□ -0.29
CCDC40-201ENST00000269318 CYP2G1PQ6ZSU1 146 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 NPIPB3Q92617 1050 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 ISOC2Q96AB3 205 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 SDF2L1Q9HCN8 221 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 ZNF727A8MUV8 499 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 FOXH1O75593 365 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 IGHV3-48P01763 117 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 PLGLAQ15195 96 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 FAM78BQ5VT40 261 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 MIR17HGQ75NE6 70 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 SRSF8Q9BRL6 282 aaKnown RBP13.25□□□□□ -0.29
CCDC40-201ENST00000269318 FUT9Q9Y231 359 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 POLR3KQ9Y2Y1 108 aaPredicted RBP13.25□□□□□ -0.29
CCDC40-201ENST00000269318 DMRT1Q9Y5R6 373 aa13.25□□□□□ -0.29
CCDC40-201ENST00000269318 F11RQ9Y624 299 aaKnown RBP13.25□□□□□ -0.29
CCDC40-201ENST00000269318 PSMB11A5LHX3 300 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 OR5G3P0C626 314 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 GCHFRP30047 84 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 UBE2E1P51965 193 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 UBE2G2P60604 165 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 RUSC1-AS1Q66K80 236 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 Q8N6K4 173 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 OR2T10Q8NGZ9 312 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 NANPQ8TBE9 248 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 HIST1H2BAQ96A08 127 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 AJUBAQ96IF1 538 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 YPEL4Q96NS1 127 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 C19orf24Q9BVV8 132 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 AKAP6Q13023 2319 aa13.24□□□□□ -0.29
CCDC40-201ENST00000269318 B4DEV8 164 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 NPPCP23582 126 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 ATP5G3P48201 142 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 LGALS4P56470 323 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 EBI3Q14213 229 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 ETFRF1Q6IPR1 90 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 PARLQ9H300 379 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 TBL2Q9Y4P3 447 aaKnown RBP13.23□□□□□ -0.29
CCDC40-201ENST00000269318 TCRBV4S1A1TA0A5B7 111 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 CORTO00230 105 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 RND2P52198 227 aa13.23□□□□□ -0.29
CCDC40-201ENST00000269318 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms