RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 IGHV1-69DA0A0B4J2H0 117 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 I3L521 148 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 IGHV1-69P01742 117 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 H2AFB1P0C5Y9 115 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 FGF7P21781 194 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 ZNF616Q08AN1 781 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 KLRD1Q13241 179 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 MMDQ15546 238 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 C5orf64Q2M2E5 130 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 ACOT6Q3I5F7 207 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-201ENST00000238688 TMEM144Q7Z5S9 345 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 TEX29Q8N6K0 151 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 OR1P1Q8NH06 330 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 MBD3L1Q8WWY6 194 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 C22orf15Q8WYQ4 148 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 EAF1Q96JC9 268 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-201ENST00000238688 HINT2Q9BX68 163 aa10.53□□□□□ -0.72
SLIRP-201ENST00000238688 IGLC7A0M8Q6 106 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 IGKV1D-33P01593 117 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 IGKV1-33P01594 117 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 M6PRP20645 277 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 SAA4P35542 130 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 SRP14P37108 136 aaKnown RBP10.52□□□□□ -0.73
SLIRP-201ENST00000238688 CD69Q07108 199 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 PLGLAQ15195 96 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 SSX2Q16385 188 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 MRGPRG-AS1Q2M3A8 158 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 SPINK9Q5DT21 86 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 LDLRAD2Q5SZI1 272 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 ZNF562Q6V9R5 426 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 FAM213BQ8TBF2 198 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 TMEM170AQ8WVE7 144 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 SLC35E1Q96K37 410 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 TMEM68Q96MH6 324 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 MEGF9Q9H1U4 602 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 HILPDAQ9Y5L2 63 aa10.52□□□□□ -0.73
SLIRP-201ENST00000238688 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 IGHV3-72A0A0B4J1Y9 119 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 CENPVL3A0A0U1RRI6 287 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 TCF21O43680 179 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 RPL29P47914 159 aaKnown RBP10.51□□□□□ -0.73
SLIRP-201ENST00000238688 PPT1P50897 306 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 SELENOTP62341 195 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 RUNX1Q01196 453 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 PEA15Q15121 130 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 TNXAQ16473 311 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 TUSC1Q2TAM9 212 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 TOR2AQ5JU69 321 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 TREML4Q6UXN2 200 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 LHFPL4Q7Z7J7 247 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 SRSF12Q8WXF0 261 aaKnown RBP10.51□□□□□ -0.73
SLIRP-201ENST00000238688 HRH4Q9H3N8 390 aa10.51□□□□□ -0.73
SLIRP-201ENST00000238688 CTXND1A0A1B0GTU2 59 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 SEC14L6B5MCN3 397 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 PLXNB1O43157 2135 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 IFNA1P01562 189 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 HLA-DRB1P01911 266 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 OR13C7P0DN81 318 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 TMEM11P17152 192 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 AKR1C1Q04828 323 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 WT1-ASQ06250 92 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 HES1Q14469 280 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 C16orf82Q7Z2V1 217 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 PCNPQ8WW12 178 aaKnown RBP10.5□□□□□ -0.73
SLIRP-201ENST00000238688 RNF2Q99496 336 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 P2RX4Q99571 388 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 ACTR3CQ9C0K3 210 aaPredicted RBP10.5□□□□□ -0.73
SLIRP-201ENST00000238688 RPRMQ9NS64 109 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
SLIRP-201ENST00000238688 NBEAL1Q6ZS30 2694 aa10.49□□□□□ -0.73
SLIRP-201ENST00000238688 CGB1A6NKQ9 187 aa10.49□□□□□ -0.73
SLIRP-201ENST00000238688 M0QZK8 103 aa10.49□□□□□ -0.73
SLIRP-201ENST00000238688 FSHBP01225 129 aa10.49□□□□□ -0.73
SLIRP-201ENST00000238688 CD5P06127 495 aa10.49□□□□□ -0.73
SLIRP-201ENST00000238688 DLX1P56177 255 aa10.49□□□□□ -0.73
SLIRP-201ENST00000238688 ARSJQ5FYB0 599 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-201ENST00000238688 SLC16A13Q7RTY0 426 aa10.49□□□□□ -0.73
SLIRP-201ENST00000238688 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-201ENST00000238688 RCC1LQ96I51 464 aaKnown RBP10.49□□□□□ -0.73
SLIRP-201ENST00000238688 FBXL15Q9H469 300 aa10.49□□□□□ -0.73
SLIRP-201ENST00000238688 F11RQ9Y624 299 aaKnown RBP10.49□□□□□ -0.73
SLIRP-201ENST00000238688 SMCO3A2RU48 225 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 TEX22C9J3V5 150 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 CNIH1O95406 144 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 CRYGCP07315 174 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 FBP1P09467 338 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 FFAR4Q5NUL3 377 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 CCDC28AQ8IWP9 274 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 THAP8Q8NA92 274 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 OR10G4Q8NGN3 311 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 NANPQ8TBE9 248 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 SUN5Q8TC36 379 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 AJUBAQ96IF1 538 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 RITA1Q96K30 269 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 TXNDC17Q9BRA2 123 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 GGTLC1Q9BX51 225 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 SEC11CQ9BY50 192 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 C7orf69Q9H7B7 122 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms