RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 A0A087WXM4 84 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 MEIS3P1A6NDR6 274 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 NUPR2A6NF83 97 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 NUPL2O15504 423 aaKnown RBP8.89□□□□□ -0.99
UPF3B-204ENST00000619445 FCER2P06734 321 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 FCGR2BP31994 310 aaPredicted RBP8.89□□□□□ -0.99
UPF3B-204ENST00000619445 TSPAN5P62079 268 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 STPG3Q8N7X2 389 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 SCARB1Q8WTV0 552 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 OVOL2Q9BRP0 275 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 TMEM14BQ9NUH8 114 aa8.89□□□□□ -0.99
UPF3B-204ENST00000619445 IGHV3-35A0A0C4DH35 117 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 C15orf61A6NNL5 157 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 APOA1P02647 267 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 PMP2P02689 132 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 HRH1P35367 487 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 RPS19P39019 145 aaKnown RBP8.88□□□□□ -0.99
UPF3B-204ENST00000619445 UCP3P55916 312 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 TNFRSF9Q07011 255 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 Q56UQ5 140 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 SLC25A46Q96AG3 418 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 C20orf24Q9BUV8 137 aa8.88□□□□□ -0.99
UPF3B-204ENST00000619445 K7EIM0 57 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 SPRY2O43597 315 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 ATG12O94817 140 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 TNFAIP8O95379 198 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 RPA2P15927 270 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 RCVRNP35243 200 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 G6PCP35575 357 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 MFAP4P55083 255 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 H2BFWTQ7Z2G1 175 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 OR4A16Q8NH70 328 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 GPX8Q8TED1 209 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 GALNT14Q96FL9 552 aa8.87□□□□□ -0.99
UPF3B-204ENST00000619445 HLA-DMAP28067 261 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 PAFAH1B2P68402 229 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 ERHP84090 104 aaKnown RBP8.86□□□□□ -0.99
UPF3B-204ENST00000619445 UBAC2Q8NBM4 344 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 YIPF6Q96EC8 236 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 ZNF486Q96H40 463 aaPredicted RBP8.86□□□□□ -0.99
UPF3B-204ENST00000619445 GINS3Q9BRX5 216 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 CHRDL1Q9BU40 450 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 FXYD6Q9H0Q3 95 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 SMPXQ9UHP9 88 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 KLK5Q9Y337 293 aaPredicted RBP8.86□□□□□ -0.99
UPF3B-204ENST00000619445 CXorf65A6NEN9 183 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 SCGB2A1O75556 95 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 CTSGP08311 255 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 MFAP2P55001 183 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 PRCDQ00LT1 54 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 PHLDA2Q53GA4 152 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 LYSMD2Q8IV50 215 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 C15orf40Q8WUR7 153 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 RNF183Q96D59 192 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 OR10C1Q96KK4 312 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 NSG2Q9Y328 171 aa8.86□□□□□ -0.99
UPF3B-204ENST00000619445 IGHV7-4-1A0A0J9YVY3 117 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 GNG7O60262 68 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 YIF1AO95070 293 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 EIF4EP06730 217 aaKnown RBP8.85□□□□□ -0.99
UPF3B-204ENST00000619445 CTSDP07339 412 aaPredicted RBP8.85□□□□□ -0.99
UPF3B-204ENST00000619445 TBPP20226 339 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 ADMP35318 185 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 NPBWR1P48145 328 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 HSPE1P61604 102 aaKnown RBP8.85□□□□□ -0.99
UPF3B-204ENST00000619445 DEFB135Q30KP9 77 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 MZT2AQ6P582 158 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 LYG2Q86SG7 212 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 TBC1D26Q86UD7 250 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 TMEM116Q8NCL8 245 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 AP3S1Q92572 193 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 SEC22AQ96IW7 307 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 NXF2Q9GZY0 626 aaKnown RBP8.85□□□□□ -0.99
UPF3B-204ENST00000619445 COMMD3Q9UBI1 195 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 SELENOKQ9Y6D0 94 aa8.85□□□□□ -0.99
UPF3B-204ENST00000619445 TRAV14DV4A0A0A6YYC5 116 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 A0A0J9YWU9 116 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 F8W735 103 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-204ENST00000619445 INS-IGF2F8WCM5 200 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 CORTO00230 105 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 B3GALNT1O75752 331 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 SNCAP37840 140 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 SUB1P53999 127 aaKnown RBP eCLIP8.84□□□□□ -0.99
UPF3B-204ENST00000619445 RND3P61587 244 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 LSM3P62310 102 aaKnown RBP8.84□□□□□ -0.99
UPF3B-204ENST00000619445 ARRDC1Q8N5I2 433 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 GATAD1Q8WUU5 269 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 LINC00476Q8WZB0 136 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 MISP3Q96FF7 219 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 RHPN1-AS1Q9BWJ2 59 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 TMEM231Q9H6L2 316 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 UBQLN2Q9UHD9 624 aa8.84□□□□□ -0.99
UPF3B-204ENST00000619445 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
UPF3B-204ENST00000619445 MPTX1A8MV57 137 aa8.83□□□□□ -1
UPF3B-204ENST00000619445 I3L2K1 104 aa8.83□□□□□ -1
UPF3B-204ENST00000619445 CHEK1O14757 476 aa8.83□□□□□ -1
UPF3B-204ENST00000619445 MT-CO2P00403 227 aa8.83□□□□□ -1
UPF3B-204ENST00000619445 TGFBR1P36897 503 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms