RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 F6UB75 175 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 LINC01619G3V211 115 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 CHST10O43529 356 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 FABP3P05413 133 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 PFN1P07737 140 aaKnown RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 MMP7P09237 267 aaPredicted RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 CSF3P09919 207 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR12D1P0DN82 309 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 CPMP14384 443 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 ZNF25P17030 456 aaPredicted RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 MYL9P24844 172 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 CDK2P24941 298 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 AGTR1P30556 359 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 RRAS2P62070 204 aaPredicted RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 MRPS10P82664 201 aaKnown RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 CDK5Q00535 292 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 FUT5Q11128 374 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 BIKQ13323 160 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 EBPQ15125 230 aaKnown RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 TMEM255AQ5JRV8 349 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 HMGN2P46Q86SG4 172 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 LINC01551Q86U37 167 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OSR2Q8N2R0 312 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 NPBQ8NG41 125 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR11H6Q8NGC7 330 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR52L1Q8NGH7 329 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR51A2Q8NGJ7 313 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR5D16Q8NGK9 328 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR10G4Q8NGN3 311 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 OR10D3Q8NH80 312 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 ZNF675Q8TD23 568 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 GPR119Q8TDV5 335 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 POP5Q969H6 163 aaKnown RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 FMC1Q96HJ9 113 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 FAM19A4Q96LR4 140 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 RDH12Q96NR8 316 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 WFDC6Q9BQY6 131 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 RTBDNQ9BSG5 229 aaPredicted RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 DOHHQ9BU89 302 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 MROQ9BYG7 248 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 GABARAPL1Q9H0R8 117 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 Q9H521 79 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 UBQLN4Q9NRR5 601 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 MRPL27Q9P0M9 148 aaKnown RBP3.07□□□□□ -1.92
NUP88-213ENST00000576862 VAX2Q9UIW0 290 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 PRNDQ9UKY0 176 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 ZNF780BQ9Y6R6 833 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 U3KQA8 63 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 C5orf42Q9H799 3197 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 TICRRQ7Z2Z1 1910 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 KNL1Q8NG31 2342 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 ZDBF2Q9HCK1 2354 aa3.07□□□□□ -1.92
NUP88-213ENST00000576862 IGLV4-69A0A075B6H9 119 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 TRAV39A0A0B4J263 110 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 IGHV3OR16-9A0A0B4J2B5 98 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 A0A1B0GX51 115 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 TLCD2A6NGC4 264 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 ZNF726A6NNF4 738 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 EEF1E1-BLOC1S5C9J1V9 151 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 TP53I11O14683 189 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 FFAR1O14842 300 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 HMGB3O15347 200 aaKnown RBP3.06□□□□□ -1.92
NUP88-213ENST00000576862 EEF1E1O43324 174 aaKnown RBP3.06□□□□□ -1.92
NUP88-213ENST00000576862 REM1O75628 298 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 YIF1AO95070 293 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 CDRT1O95170 752 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 EPPINO95925 133 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 IGF2P01344 180 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 HMGN2P05204 90 aaKnown RBP3.06□□□□□ -1.92
NUP88-213ENST00000576862 POLR2IP36954 125 aaKnown RBP3.06□□□□□ -1.92
NUP88-213ENST00000576862 DAPP51397 102 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 HERVK_113P61574 105 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 RAP1AP62834 184 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 SELENOWP63302 87 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 HBG1P69891 147 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 HBG2P69892 147 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 MXD1Q05195 221 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 ZNF684Q5T5D7 378 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 LAIR2Q6ISS4 152 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 PLET1Q6UQ28 207 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 C12orf54Q6X4T0 127 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 DGAT2L6Q6ZPD8 337 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 FAM24BQ8N5W8 94 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 SLC30A7Q8NEW0 376 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 OR5K1Q8NHB7 308 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 FGF11Q92914 225 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 NARS2Q96I59 477 aaKnown RBP3.06□□□□□ -1.92
NUP88-213ENST00000576862 SLC35G5Q96KT7 338 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 OR7D2Q96RA2 312 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 PDCD10Q9BUL8 212 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 EMC6Q9BV81 110 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 ULBP3Q9BZM4 244 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 OR51E2Q9H255 320 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 TMEM9BQ9NQ34 198 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 ACER3Q9NUN7 267 aa3.06□□□□□ -1.92
NUP88-213ENST00000576862 RSL24D1Q9UHA3 163 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms