RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ZBTB8BQ8NAP8 495 aaPredicted RBP11.72□□□□□ -0.53
RAB40B-203ENST00000570676 OR1S1Q8NH92 325 aa11.72□□□□□ -0.53
RAB40B-203ENST00000570676 UBE2E2Q96LR5 201 aa11.72□□□□□ -0.53
RAB40B-203ENST00000570676 C2orf50Q96LR7 162 aa11.72□□□□□ -0.53
RAB40B-203ENST00000570676 QTRT1Q9BXR0 403 aaKnown RBP11.72□□□□□ -0.53
RAB40B-203ENST00000570676 TMEM14BQ9NUH8 114 aa11.72□□□□□ -0.53
RAB40B-203ENST00000570676 COA4Q9NYJ1 87 aa11.72□□□□□ -0.53
RAB40B-203ENST00000570676 EGR2P11161 476 aaPredicted RBP11.71□□□□□ -0.53
RAB40B-203ENST00000570676 MYOD1P15172 320 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 MAS1LP35410 378 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 BCAP31P51572 246 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 H2BFSP57053 126 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 CX3CL1P78423 397 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 RUNX1Q01196 453 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 TNXAQ16473 311 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 OR11H1Q8NG94 326 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 COMMD5Q9GZQ3 224 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 FKBP11Q9NYL4 201 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 FOXA2Q9Y261 457 aaPredicted RBP11.71□□□□□ -0.53
RAB40B-203ENST00000570676 OR51B2Q9Y5P1 312 aa11.71□□□□□ -0.53
RAB40B-203ENST00000570676 ST8SIA3O43173 380 aa11.7□□□□□ -0.54
RAB40B-203ENST00000570676 PITX3O75364 302 aa11.7□□□□□ -0.54
RAB40B-203ENST00000570676 NXPH3O95157 252 aa11.7□□□□□ -0.54
RAB40B-203ENST00000570676 CNIH1O95406 144 aa11.7□□□□□ -0.54
RAB40B-203ENST00000570676 FGF2P09038 288 aa11.7□□□□□ -0.54
RAB40B-203ENST00000570676 C10orf55Q5SWW7 151 aa11.7□□□□□ -0.54
RAB40B-203ENST00000570676 C9orf66Q5T8R8 295 aa11.7□□□□□ -0.54
RAB40B-203ENST00000570676 ZNF429Q86V71 674 aa11.7□□□□□ -0.54
RAB40B-203ENST00000570676 ZNF436Q9C0F3 470 aaPredicted RBP11.7□□□□□ -0.54
RAB40B-203ENST00000570676 TEX50A0A1B0GTY4 177 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 A0A1W2PN81 502 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 SCGB1D2O95969 90 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 IFNA17P01571 189 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 TRAPPC2P0DI81 140 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 TRAPPC2BP0DI82 140 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 CHRNA7P36544 502 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 RAB9AP51151 201 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
RAB40B-203ENST00000570676 SSBP2P81877 361 aaPredicted RBP11.69□□□□□ -0.54
RAB40B-203ENST00000570676 CYCSP99999 105 aaKnown RBP11.69□□□□□ -0.54
RAB40B-203ENST00000570676 FXYD3Q14802 87 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 AARDQ4LEZ3 155 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 C11orf87Q6NUJ2 197 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 TMEM65Q6PI78 240 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 ZNF562Q6V9R5 426 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 OR4D5Q8NGN0 318 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 WDR89Q96FK6 387 aaPredicted RBP11.69□□□□□ -0.54
RAB40B-203ENST00000570676 OR5B12Q96R08 314 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 ZNF257Q9Y2Q1 563 aa11.69□□□□□ -0.54
RAB40B-203ENST00000570676 SEC14L6B5MCN3 397 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 OR8U8P0C7N1 319 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 NKX2-1P43699 371 aaPredicted RBP11.68□□□□□ -0.54
RAB40B-203ENST00000570676 RPL27AP46776 148 aaKnown RBP11.68□□□□□ -0.54
RAB40B-203ENST00000570676 TNFRSF9Q07011 255 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 ZNF616Q08AN1 781 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 SPINK9Q5DT21 86 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 OR5B3Q8NH48 314 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 GRPEL2Q8TAA5 225 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 ABHD5Q8WTS1 349 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 CHAC2Q8WUX2 184 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 ARPC1AQ92747 370 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 FYTTD1Q96QD9 318 aaKnown RBP11.68□□□□□ -0.54
RAB40B-203ENST00000570676 B9D2Q9BPU9 175 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 FAM103A1Q9BTL3 118 aaKnown RBP11.68□□□□□ -0.54
RAB40B-203ENST00000570676 HINT2Q9BX68 163 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 NMES1Q9C002 83 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 HSPB7Q9UBY9 170 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
RAB40B-203ENST00000570676 FAM90A26D6RGX4 464 aa11.67□□□□□ -0.54
RAB40B-203ENST00000570676 MBPP02686 304 aaPredicted RBP11.67□□□□□ -0.54
RAB40B-203ENST00000570676 GIPP09681 153 aaPredicted RBP11.67□□□□□ -0.54
RAB40B-203ENST00000570676 SPCS3P61009 180 aa11.67□□□□□ -0.54
RAB40B-203ENST00000570676 ID3Q02535 119 aa11.67□□□□□ -0.54
RAB40B-203ENST00000570676 IL15RAQ13261 267 aa11.67□□□□□ -0.54
RAB40B-203ENST00000570676 OR1N2Q8NGR9 330 aa11.67□□□□□ -0.54
RAB40B-203ENST00000570676 OR52E5Q8NH55 327 aa11.67□□□□□ -0.54
RAB40B-203ENST00000570676 SRSF12Q8WXF0 261 aaKnown RBP11.67□□□□□ -0.54
RAB40B-203ENST00000570676 MAGT1Q9H0U3 335 aa11.67□□□□□ -0.54
RAB40B-203ENST00000570676 MSGN1A6NI15 193 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 CEBPZOSA8MTT3 80 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 E7EUB6 86 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
RAB40B-203ENST00000570676 S100A10P60903 97 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 RAP2BP61225 183 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 PRCDQ00LT1 54 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 LRRC37A5PQ49AS3 106 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 ASB13Q8WXK3 278 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 PRR25Q96S07 402 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 RBKSQ9H477 322 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
RAB40B-203ENST00000570676 ZMAT5Q9UDW3 170 aaKnown RBP11.66□□□□□ -0.54
RAB40B-203ENST00000570676 LSM5Q9Y4Y9 91 aaKnown RBP11.66□□□□□ -0.54
RAB40B-203ENST00000570676 DNAH9Q9NYC9 4486 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 A0A1B0GW64 132 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 CGB1A6NKQ9 187 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 WRBO00258 174 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 MED6O75586 246 aa11.65□□□□□ -0.54
RAB40B-203ENST00000570676 CCNKO75909 580 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms