RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 HARBI1Q96MB7 349 aa6.59□□□□□ -1.35
SMAD3-212ENST00000559937 BBC3Q96PG8 261 aaPredicted RBP6.59□□□□□ -1.35
SMAD3-212ENST00000559937 OR5B12Q96R08 314 aa6.59□□□□□ -1.35
SMAD3-212ENST00000559937 RNF2Q99496 336 aa6.59□□□□□ -1.35
SMAD3-212ENST00000559937 NABP2Q9BQ15 211 aa6.59□□□□□ -1.35
SMAD3-212ENST00000559937 MRPL20Q9BYC9 149 aaKnown RBP6.59□□□□□ -1.35
SMAD3-212ENST00000559937 SRD5A3Q9H8P0 318 aa6.59□□□□□ -1.35
SMAD3-212ENST00000559937 SH3BGRL2Q9UJC5 107 aa6.59□□□□□ -1.35
SMAD3-212ENST00000559937 TGIF2-C20orf24A0A0A6YYL0 155 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 SRRM4A7MD48 611 aaKnown RBP6.58□□□□□ -1.36
SMAD3-212ENST00000559937 DVL1O14640 695 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 HMGB3O15347 200 aaKnown RBP6.58□□□□□ -1.36
SMAD3-212ENST00000559937 ARL14EPLP0DKL9 152 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 CCL3L1P16619 93 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 GCHFRP30047 84 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 CHRNB4P30926 498 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 GPX4P36969 197 aaPredicted RBP6.58□□□□□ -1.36
SMAD3-212ENST00000559937 RPL8P62917 257 aaKnown RBP6.58□□□□□ -1.36
SMAD3-212ENST00000559937 ERHP84090 104 aaKnown RBP6.58□□□□□ -1.36
SMAD3-212ENST00000559937 CD69Q07108 199 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 LYPD2Q6UXB3 125 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 C16orf82Q7Z2V1 217 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 MRPL41Q8IXM3 137 aaKnown RBP6.58□□□□□ -1.36
SMAD3-212ENST00000559937 STPG3Q8N7X2 389 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 ST6GALNAC3Q8NDV1 305 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 OR4C13Q8NGP0 309 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 GATAD1Q8WUU5 269 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 CCL17Q92583 94 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 C11orf52Q96A22 123 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 FLYWCH2Q96CP2 140 aaKnown RBP6.58□□□□□ -1.36
SMAD3-212ENST00000559937 IMMP2LQ96T52 175 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 COMMD5Q9GZQ3 224 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 PRORYQ9H606 182 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 NDUFA4L2Q9NRX3 87 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 CTSZQ9UBR2 303 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 SLC45A2Q9UMX9 530 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 WASHC3Q9Y3C0 194 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 LY96Q9Y6Y9 160 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 URGCP-MRPS24S4R325 110 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 TNCP24821 2201 aa6.58□□□□□ -1.36
SMAD3-212ENST00000559937 SETXQ7Z333 2677 aaKnown RBP6.58□□□□□ -1.36
SMAD3-212ENST00000559937 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.57□□□□□ -1.36
SMAD3-212ENST00000559937 GGCTO75223 188 aaKnown RBP6.57□□□□□ -1.36
SMAD3-212ENST00000559937 IGKV1-16P04430 117 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 TYMSP04818 313 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 OR5G3P0C626 314 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 LINC00869P0C866 280 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 IGHV1-8P0DP01 117 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 IGFBP2P18065 325 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 NPPCP23582 126 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 GALR1P47211 349 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 CDX1P47902 265 aaPredicted RBP6.57□□□□□ -1.36
SMAD3-212ENST00000559937 LGALS7P47929 136 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 PPOXP50336 477 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 SUB1P53999 127 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMAD3-212ENST00000559937 GNB1P62873 340 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 KLRB1Q12918 225 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 HLA-DRB5Q30154 266 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 VMA21Q3ZAQ7 101 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 KCNIP4Q6PIL6 250 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 PQLC2Q6ZP29 291 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 OR51G1Q8NGK1 321 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 OR10X1Q8NGY0 326 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 RNASEH2CQ8TDP1 164 aaKnown RBP6.57□□□□□ -1.36
SMAD3-212ENST00000559937 ABHD5Q8WTS1 349 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 UHRF2Q96PU4 802 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 HINT2Q9BX68 163 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 MRPL32Q9BYC8 188 aaKnown RBP6.57□□□□□ -1.36
SMAD3-212ENST00000559937 PATZ1Q9HBE1 687 aaKnown RBP6.57□□□□□ -1.36
SMAD3-212ENST00000559937 TMEM167BQ9NRX6 74 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 FUT9Q9Y231 359 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 PCNX1Q96RV3 2341 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 POLEQ07864 2286 aa6.57□□□□□ -1.36
SMAD3-212ENST00000559937 PHOX2AO14813 284 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST1H2BKO60814 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 TRGC2P03986 189 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST1H2BJP06899 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 FAM87AP0C7U9 286 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST1H2BOP23527 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST1H2BBP33778 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 ATP5G3P48201 142 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 PRRX1P54821 245 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 FAM3BP58499 235 aaPredicted RBP6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST1H2BDP58876 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 TAS2R45P59539 299 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST1H2BCP62807 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 LCN2P80188 198 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 PAX2Q02962 417 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST2H2BEQ16778 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 GCSAMLQ5JQS6 135 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.56□□□□□ -1.36
SMAD3-212ENST00000559937 CST9LP1Q5W188 147 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 LINC01551Q86U37 167 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 TGIF2LXQ8IUE1 241 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 ZCCHC24Q8N2G6 241 aaKnown RBP6.56□□□□□ -1.36
SMAD3-212ENST00000559937 TEX45Q8NA69 505 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 C8orf46Q8TAG6 207 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 SSMEM1Q8WWF3 244 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST1H2BHQ93079 126 aa6.56□□□□□ -1.36
SMAD3-212ENST00000559937 HIST1H2BNQ99877 126 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms