RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 A0A0G2JLM5 398 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 DEFA4P12838 97 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 SPCS3P61009 180 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 RHOGP84095 191 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 RUNX1Q01196 453 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 GGNBP1Q5YKI7 109 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 PLET1Q6UQ28 207 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 OR2C3Q8N628 320 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 OR5B12Q96R08 314 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 MARVELD1Q9BSK0 173 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 PALMDQ9NP74 551 aa16.1■□□□□ 0.17
SCARB1-211ENST00000546215 IGLV11-55A0A075B6I3 123 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 FAM223BA6NKX1 122 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 INS-IGF2F8WCM5 200 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 PITX3O75364 302 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 ADAP1O75689 374 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 OR2J3O76001 311 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 IGHV3-11P01762 117 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 IL5P05113 134 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 SLC25A6P12236 298 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 DEFB136Q30KP8 78 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 ETV3LQ6ZN32 361 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 FAM223AQ8IWN6 122 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 NECAP1Q8NC96 275 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 ZNF431Q8TF32 576 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-211ENST00000546215 RAX2Q96IS3 184 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 C13orf42A0A1B0GVH6 325 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 MRPL41Q8IXM3 137 aaKnown RBP16.09■□□□□ 0.17
SCARB1-211ENST00000546215 CACFD1Q9UGQ2 172 aa16.09■□□□□ 0.17
SCARB1-211ENST00000546215 F11RQ9Y624 299 aaKnown RBP16.09■□□□□ 0.17
SCARB1-211ENST00000546215 INMT-MINDY4F8WBC2 141 aa16.08■□□□□ 0.16
SCARB1-211ENST00000546215 LGALS1P09382 135 aaKnown RBP16.08■□□□□ 0.16
SCARB1-211ENST00000546215 SPNP16150 400 aa16.08■□□□□ 0.16
SCARB1-211ENST00000546215 HIST1H1BP16401 226 aaKnown RBP16.08■□□□□ 0.16
SCARB1-211ENST00000546215 MFAP2P55001 183 aa16.08■□□□□ 0.16
SCARB1-211ENST00000546215 ERHP84090 104 aaKnown RBP16.08■□□□□ 0.16
SCARB1-211ENST00000546215 DUX3Q96PT4 197 aa16.08■□□□□ 0.16
SCARB1-211ENST00000546215 P2RX4Q99571 388 aa16.08■□□□□ 0.16
SCARB1-211ENST00000546215 FBXL7Q9UJT9 491 aa16.08■□□□□ 0.16
SCARB1-211ENST00000546215 MPTX1A8MV57 137 aa16.07■□□□□ 0.16
SCARB1-211ENST00000546215 CCL24O00175 119 aa16.07■□□□□ 0.16
SCARB1-211ENST00000546215 NXPH3O95157 252 aa16.07■□□□□ 0.16
SCARB1-211ENST00000546215 NDUFB8O95169 186 aa16.07■□□□□ 0.16
SCARB1-211ENST00000546215 C15orf32Q32M92 178 aa16.07■□□□□ 0.16
SCARB1-211ENST00000546215 TREML4Q6UXN2 200 aa16.07■□□□□ 0.16
SCARB1-211ENST00000546215 ZNF114Q8NC26 417 aa16.07■□□□□ 0.16
SCARB1-211ENST00000546215 HSPB7Q9UBY9 170 aa16.07■□□□□ 0.16
SCARB1-211ENST00000546215 MYCNOSP40205 109 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 HOXA1P49639 335 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-211ENST00000546215 ATP5G2Q06055 141 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 TNFRSF9Q07011 255 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 SLC25A24Q6NUK1 477 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 ZNF343Q6P1L6 599 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 OR11H1Q8NG94 326 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 OR1P1Q8NH06 330 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 OR1S1Q8NH92 325 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 MGAM2Q2M2H8 2515 aa16.06■□□□□ 0.16
SCARB1-211ENST00000546215 PTTG1O95997 202 aa16.05■□□□□ 0.16
SCARB1-211ENST00000546215 IFNA21P01568 189 aa16.05■□□□□ 0.16
SCARB1-211ENST00000546215 PF4P02776 101 aa16.05■□□□□ 0.16
SCARB1-211ENST00000546215 DCTN2Q13561 401 aaKnown RBP16.05■□□□□ 0.16
SCARB1-211ENST00000546215 FHL3Q13643 280 aa16.05■□□□□ 0.16
SCARB1-211ENST00000546215 OR1L6Q8NGR2 347 aa16.05■□□□□ 0.16
SCARB1-211ENST00000546215 ENY2Q9NPA8 101 aa16.05■□□□□ 0.16
SCARB1-211ENST00000546215 CYB5BO43169 146 aa16.04■□□□□ 0.16
SCARB1-211ENST00000546215 C12orf45Q8N5I9 185 aaPredicted RBP16.04■□□□□ 0.16
SCARB1-211ENST00000546215 OR1N2Q8NGR9 330 aa16.04■□□□□ 0.16
SCARB1-211ENST00000546215 THYN1Q9P016 225 aa16.04■□□□□ 0.16
SCARB1-211ENST00000546215 CEBPZOSA8MTT3 80 aa16.04■□□□□ 0.16
SCARB1-211ENST00000546215 PRAF2O60831 178 aa16.04■□□□□ 0.16
SCARB1-211ENST00000546215 SNCAP37840 140 aa16.04■□□□□ 0.16
SCARB1-211ENST00000546215 UXS1Q8NBZ7 420 aa16.04■□□□□ 0.16
SCARB1-211ENST00000546215 IGHV4OR15-8A0A075B7B6 117 aa16.03■□□□□ 0.16
SCARB1-211ENST00000546215 A0A087WW49 117 aa16.03■□□□□ 0.16
SCARB1-211ENST00000546215 FAM90A26D6RGX4 464 aa16.03■□□□□ 0.16
SCARB1-211ENST00000546215 HSPB1P04792 205 aaKnown RBP16.03■□□□□ 0.16
SCARB1-211ENST00000546215 ZNF616Q08AN1 781 aa16.03■□□□□ 0.16
SCARB1-211ENST00000546215 EXOSC2Q13868 293 aaKnown RBP16.03■□□□□ 0.16
SCARB1-211ENST00000546215 BSXQ3C1V8 233 aa16.03■□□□□ 0.16
SCARB1-211ENST00000546215 LINC00482Q8N8I6 264 aa16.03■□□□□ 0.16
SCARB1-211ENST00000546215 RBKSQ9H477 322 aa16.03■□□□□ 0.16
SCARB1-211ENST00000546215 GPN1Q9HCN4 374 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-211ENST00000546215 ANKRD34BA5PLL1 514 aa16.02■□□□□ 0.16
SCARB1-211ENST00000546215 MFSD2BA6NFX1 497 aa16.02■□□□□ 0.16
SCARB1-211ENST00000546215 SNRPGP15A8MWD9 76 aa16.02■□□□□ 0.16
SCARB1-211ENST00000546215 RNASE2P10153 161 aaKnown RBP16.02■□□□□ 0.16
SCARB1-211ENST00000546215 PVRIGQ6DKI7 326 aa16.02■□□□□ 0.16
SCARB1-211ENST00000546215 C11orf87Q6NUJ2 197 aa16.02■□□□□ 0.16
SCARB1-211ENST00000546215 WFDC9Q8NEX5 89 aa16.02■□□□□ 0.16
SCARB1-211ENST00000546215 OR10C1Q96KK4 312 aa16.02■□□□□ 0.16
SCARB1-211ENST00000546215 HEYLQ9NQ87 328 aaPredicted RBP16.02■□□□□ 0.16
SCARB1-211ENST00000546215 PEF1Q9UBV8 284 aaKnown RBP16.02■□□□□ 0.16
SCARB1-211ENST00000546215 S4R3C0 116 aa16.02■□□□□ 0.16
SCARB1-211ENST00000546215 NOTCH3Q9UM47 2321 aa16.02■□□□□ 0.15
SCARB1-211ENST00000546215 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.01■□□□□ 0.15
SCARB1-211ENST00000546215 TRBV12-3P01733 135 aa16.01■□□□□ 0.15
SCARB1-211ENST00000546215 DTD1Q8TEA8 209 aa16.01■□□□□ 0.15
SCARB1-211ENST00000546215 DPF1Q92782 380 aa16.01■□□□□ 0.15
SCARB1-211ENST00000546215 CXorf58Q96LI9 332 aa16.01■□□□□ 0.15
SCARB1-211ENST00000546215 RANGRFQ9HD47 186 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms