RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 OR11L1Q8NGX0 322 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 LINC01560Q8TB33 94 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 DYNC2LI1Q8TCX1 351 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 SCGB1C1Q8TD33 95 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 RAB2BQ8WUD1 216 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 CT55Q8WUE5 264 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TWIST2Q8WVJ9 160 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 YIPF6Q96EC8 236 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 PGLYRP3Q96LB9 341 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM56Q96MV1 263 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 PRAP1Q96NZ9 151 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 OR2V2Q96R30 315 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 FAAP24Q9BTP7 215 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF426Q9BUY5 554 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TAPBPLQ9BX59 468 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 UGT2B28Q9BY64 529 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 DCSTAMPQ9H295 470 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 FBXO6Q9NRD1 293 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-217ENST00000541578 C21orf62Q9NYP8 219 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TAS2R13Q9NYV9 303 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TAS2R5Q9NYW4 299 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM216Q9P0N5 145 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 DKKL1Q9UK85 242 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 COQ4Q9Y3A0 265 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF780BQ9Y6R6 833 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM56-RWDD3S4R434 201 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 NBEAL1Q6ZS30 2694 aa2.73□□□□□ -1.97
SNHG1-217ENST00000541578 LOC102724200A0A096LPH7 203 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 TRAV17A0A0B4J275 112 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 A0A0D9SEW6 157 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 KIR2DS1A0A191URI9 304 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 LOC389332A0A1B0GUA5 103 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 A0A1B0GX12 115 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 CD300LBA8K4G0 201 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 EFCAB9A8MZ26 197 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 PANO1I0J062 215 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 J3QRK9 145 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 TPST1O60507 370 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 OR2B3O76000 313 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 OR2J2O76002 312 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 GADD45GO95257 159 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 SERPINA1P01009 418 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 IGKV1D-16P01601 117 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 SHBGP04278 402 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 GYPCP04921 128 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 HTR1AP08908 422 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 GABRA1P14867 456 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 UCHL3P15374 230 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 NPY1RP25929 384 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 HLA-DMAP28067 261 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 ETV6P41212 452 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 IDH2P48735 452 aaKnown RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 RPL14P50914 215 aaKnown RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 RAB5CP51148 216 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 TAS2R43P59537 309 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 RPL19P84098 196 aaKnown RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 PTGES3Q15185 160 aaKnown RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 PYCR3Q53H96 274 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 Q5BKY6 102 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 RNASE13Q5GAN3 156 aaKnown RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 ZNF684Q5T5D7 378 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 OGFRL1Q5TC84 451 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 LAMTOR1Q6IAA8 161 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 FAM71E1Q6IPT2 247 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 SCIMPQ6UWF3 145 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 IGFL2Q6UWQ7 119 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 ZFP2Q6ZN57 461 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 NTM-AS1Q6ZSK4 140 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 WDR86Q86TI4 376 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 HS3ST5Q8IZT8 346 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 DEFB106AQ8N104 65 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 CLDN22Q8N7P3 220 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 SLC25A29Q8N8R3 303 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 PXT1Q8NFP0 134 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 OR5J2Q8NH18 312 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 CCL4L1Q8NHW4 92 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 CD200R1Q8TD46 325 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 SLC37A2Q8TED4 501 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 C11orf40Q8WZ69 217 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 MAGOHBQ96A72 148 aaKnown RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 SLC25A46Q96AG3 418 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 HYLS1Q96M11 299 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 YPEL4Q96NS1 127 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 SDHCQ99643 169 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 HOPXQ9BPY8 73 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 MARVELD1Q9BSK0 173 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 TMEM109Q9BVC6 243 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 CACYBPQ9HB71 228 aaKnown RBP2.72□□□□□ -1.97
SNHG1-217ENST00000541578 HRASLSQ9HDD0 168 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 PARP11Q9NR21 331 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 ANAPC11Q9NYG5 84 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 PRO0461Q9UI25 63 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 GNG8Q9UK08 70 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 ARL5AQ9Y689 179 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 ACANP16112 2415 aa2.72□□□□□ -1.97
SNHG1-217ENST00000541578 MXRA5Q9NR99 2828 aa2.71□□□□□ -1.98
SNHG1-217ENST00000541578 JMJD1CQ15652 2540 aa2.71□□□□□ -1.98
SNHG1-217ENST00000541578 IGHV3-72A0A0B4J1Y9 119 aa2.71□□□□□ -1.98
SNHG1-217ENST00000541578 TRAV8-2A0A0B4J237 113 aa2.71□□□□□ -1.98
SNHG1-217ENST00000541578 TMEM72A0PK05 275 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms