RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 NXF2Q9GZY0 626 aaKnown RBP11.28□□□□□ -0.6
RAB40B-202ENST00000538809 MLXQ9UH92 298 aa11.28□□□□□ -0.6
RAB40B-202ENST00000538809 F11RQ9Y624 299 aaKnown RBP11.28□□□□□ -0.6
RAB40B-202ENST00000538809 RAB3DO95716 219 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 PGAM2P15259 253 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 CBLN1P23435 193 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 PPP5CP53041 499 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 PIGPP57054 158 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 TM4SF20Q53R12 229 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 BTNL8Q6UX41 500 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 TMEM61Q8N0U2 210 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 DIRAS2Q96HU8 199 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 TP53RKQ96S44 253 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 SOSTQ9BQB4 213 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 SPATA25Q9BR10 227 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 RETNQ9HD89 108 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 FKBP11Q9NYL4 201 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 TECRQ9NZ01 308 aaKnown RBP11.27□□□□□ -0.61
RAB40B-202ENST00000538809 THYN1Q9P016 225 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.61
RAB40B-202ENST00000538809 RABL2BQ9UNT1 228 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 CEPT1Q9Y6K0 416 aa11.27□□□□□ -0.61
RAB40B-202ENST00000538809 OR2T8A6NH00 312 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 CYB5BO43169 146 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 TGOLN2O43493 480 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 ZNF57Q68EA5 555 aaPredicted RBP11.26□□□□□ -0.61
RAB40B-202ENST00000538809 FAAP20Q6NZ36 180 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 PLET1Q6UQ28 207 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 UXS1Q8NBZ7 420 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 VN1R17PQ8TDU5 208 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 CITED4Q96RK1 184 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 SRD5A3Q9H8P0 318 aa11.26□□□□□ -0.61
RAB40B-202ENST00000538809 DYNC2H1Q8NCM8 4307 aaKnown RBP11.26□□□□□ -0.61
RAB40B-202ENST00000538809 F8W735 103 aaPredicted RBP11.25□□□□□ -0.61
RAB40B-202ENST00000538809 GSTZ1O43708 216 aaPredicted RBP11.25□□□□□ -0.61
RAB40B-202ENST00000538809 SCAF4O95104 1147 aaKnown RBP11.25□□□□□ -0.61
RAB40B-202ENST00000538809 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
RAB40B-202ENST00000538809 IL18Q14116 193 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 CASC10Q5T4H9 136 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 H2BFWTQ7Z2G1 175 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 OR4C16Q8NGL9 310 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 ZFAND1Q8TCF1 268 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 MARCH1Q8TCQ1 289 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 STARD9Q9P2P6 4700 aa11.25□□□□□ -0.61
RAB40B-202ENST00000538809 C3orf85A0A1B0GTC6 90 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 K7EIM0 57 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 UCP1P25874 307 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 TNFSF8P32971 234 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 PRCDQ00LT1 54 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 MEF2DQ14814 521 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 IZUMO4Q1ZYL8 232 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 SCGB2B2Q4G0G5 96 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 ZFAND6Q6FIF0 208 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 TMEM56Q96MV1 263 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 ZNF436Q9C0F3 470 aaPredicted RBP11.24□□□□□ -0.61
RAB40B-202ENST00000538809 C6orf62Q9GZU0 229 aaPredicted RBP11.24□□□□□ -0.61
RAB40B-202ENST00000538809 RBM38Q9H0Z9 239 aaKnown RBP11.24□□□□□ -0.61
RAB40B-202ENST00000538809 EDA2RQ9HAV5 297 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 PALMDQ9NP74 551 aa11.24□□□□□ -0.61
RAB40B-202ENST00000538809 IGHV3OR16-8A0A075B7F1 116 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 ANKRD20A5PA0PJZ0 165 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
RAB40B-202ENST00000538809 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
RAB40B-202ENST00000538809 NOL3O60936 208 aaKnown RBP11.23□□□□□ -0.61
RAB40B-202ENST00000538809 RBMY1DP0C7P1 496 aaKnown RBP11.23□□□□□ -0.61
RAB40B-202ENST00000538809 AKAIN1P0CW23 69 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 LYL1P12980 280 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 HSPE1P61604 102 aaKnown RBP11.23□□□□□ -0.61
RAB40B-202ENST00000538809 SURF2Q15527 256 aaPredicted RBP11.23□□□□□ -0.61
RAB40B-202ENST00000538809 SPINK9Q5DT21 86 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
RAB40B-202ENST00000538809 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 OR1L6Q8NGR2 347 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 OR1P1Q8NH06 330 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 SCARB1Q8WTV0 552 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 TMEM190Q8WZ59 177 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 RTBDNQ9BSG5 229 aaPredicted RBP11.23□□□□□ -0.61
RAB40B-202ENST00000538809 CHRDL1Q9BU40 450 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 C21orf62Q9NYP8 219 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 COPZ2Q9P299 210 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
RAB40B-202ENST00000538809 A0A0B4J293 547 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 A0A0G2JRQ6 117 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 INS-IGF2F8WCM5 200 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 SP6Q3SY56 376 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 Q56UQ5 140 aa11.22□□□□□ -0.61
RAB40B-202ENST00000538809 SLC16A13Q7RTY0 426 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms