RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	ZNF600	Q6ZNG1	722 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	OOSP1	A8MZH6	123 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	PPP1R17	O96001	155 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	PSMB11	A5LHX3	300 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	LEMD1	Q68G75	181 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	ZNF497	Q6ZNH5	498 aa		13.14	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TRAV14DV4	A0A0A6YYC5	116 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TRAV20	A0A0B4J274	112 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	SRRM5	B3KS81	715 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	IGFBP2	P18065	325 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	SRD5A1	P18405	259 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	OR52E5	Q8NH55	327 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	MINOS1	Q5TGZ0	78 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	CBLN2	Q8IUK8	224 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	MINOS1-NBL1	R4GNA1	71 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	DOPEY2	Q9Y3R5	2298 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	ADIPOQ	Q15848	244 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	C2orf68	Q2NKX9	166 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	PVRIG	Q6DKI7	326 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	RAB37	Q96AX2	223 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	NPCDR1	Q9BY65	106 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532		A6NDN8	102 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	NBL1	P41271	181 aa		13.13	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TRAV24	A0A0B4J272	114 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TMEM178B	H3BS89	294 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	NMU	P48645	174 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	MEIG1	Q5JSS6	88 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	VMO1	Q7Z5L0	202 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	FAM131C	Q96AQ9	280 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	SLC50A1	Q9BRV3	221 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TRBV20OR9-2	A0A075B6H5	130 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TRAV41	A0A0B4J266	112 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532		M0R381	172 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	FOXG1	P55316	489 aa	Predicted RBP	13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	FGFBP3	Q8TAT2	258 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	NEU1	Q99519	415 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	SDF2L1	Q9HCN8	221 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	EFNA2	O43921	213 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	COX6C	P09669	75 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	IGFBP3	P17936	291 aa	Predicted RBP	13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	UQCRFS1	P47985	274 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	ZP1	P60852	638 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	SUMO2	P61956	95 aa	Known RBP	13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	GLRX5	Q86SX6	157 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	C3orf56	Q8N813	242 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	LINC01356	Q8N9X3	169 aa		13.12	□□□□□ -0.31
NCAPD3-213	ENST00000534532	FBLL1	A6NHQ2	334 aa	Known RBP	13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	CRYGS	P22914	178 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	PTPRF	P10586	1907 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	LYZL4	Q96KX0	146 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	CRIM1	Q9NZV1	1036 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	ANKRD36	A6QL64	1941 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TMEM238L	A0A1B0GVL6	79 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532		A6NJY4	79 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	STAG3L2	P0CL84	134 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	LGALS3	P17931	250 aa	Known RBP	13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	PRSS2	P07478	247 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	C11orf91	Q3C1V1	193 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	NDUFS8	O00217	210 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	MST1	P26927	711 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	LEP	P41159	167 aa		13.11	□□□□□ -0.31
NCAPD3-213	ENST00000534532	NCMAP	Q5T1S8	102 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	IGHV2-26	A0A0B4J1V2	119 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	CIDEA	O60543	219 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TMEM70	Q9BUB7	260 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	SAP30	O75446	220 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	RNASE4	P34096	147 aa	Known RBP	13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	KCNS1	Q96KK3	526 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	KLK15	Q9H2R5	256 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	LINC00862	A6NCI5	91 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	ATG101	Q9BSB4	218 aa		13.1	□□□□□ -0.31
NCAPD3-213	ENST00000534532	RALGAPA1	Q6GYQ0	2036 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	C1QTNF9B	B2RNN3	333 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	LYPD3	O95274	346 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	C1QTNF9	P0C862	333 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	CD300C	Q08708	224 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	PET117	Q6UWS5	81 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	TMEM144	Q7Z5S9	345 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	LCT	P09848	1927 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	C15orf61	A6NNL5	157 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	DEFB121	Q5J5C9	76 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	HEPN1	Q6WQI6	88 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	FBLN5	Q9UBX5	448 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	MRPS16	Q9Y3D3	137 aa	Known RBP	13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	DIRC3	C9JPN6	131 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532		H3BUX3	64 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532		M0R1W7	72 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	DANCR	P0C864	163 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	AGA	P20933	346 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	PAX8	Q06710	450 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	CENPW	Q5EE01	88 aa		13.09	□□□□□ -0.31
NCAPD3-213	ENST00000534532	EIF3G	O75821	320 aa	Known RBP eCLIP	13.08	□□□□□ -0.31
NCAPD3-213	ENST00000534532	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.08	□□□□□ -0.31
NCAPD3-213	ENST00000534532	RNF125	Q96EQ8	232 aa		13.08	□□□□□ -0.31
NCAPD3-213	ENST00000534532	PRO1933	Q9H354	126 aa		13.08	□□□□□ -0.31
NCAPD3-213	ENST00000534532	IGKV1-9	A0A0C4DH69	117 aa		13.08	□□□□□ -0.32
NCAPD3-213	ENST00000534532	LEPROTL1	O95214	131 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms