RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 C1QL4Q86Z23 238 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 OR2K2Q8NGT1 345 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 ST20Q9HBF5 79 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 MSGN1A6NI15 193 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 DUSP14O95147 198 aaKnown RBP6.41□□□□□ -1.38
CTNND1-233ENST00000532787 ZNF883P0CG24 379 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 ARPC1AQ92747 370 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 FNDC4Q9H6D8 234 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-233ENST00000532787 FBXL7Q9UJT9 491 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 ASXL3Q9C0F0 2248 aa6.41□□□□□ -1.38
CTNND1-233ENST00000532787 UPK2O00526 184 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 SLC25A20O43772 301 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 APOMO95445 188 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 CFAP161Q6P656 301 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 PPP1R27Q86WC6 154 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 SLC25A45Q8N413 288 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 REPIN1Q9BWE0 567 aaKnown RBP6.4□□□□□ -1.38
CTNND1-233ENST00000532787 PEMTQ9UBM1 199 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 IGHV3OR16-12A0A075B7B8 117 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 F2Z2F3 143 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 LINC00614P0C842 121 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 MYOD1P15172 320 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 RPL39P5Q59GN2 51 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 DCTN5Q9BTE1 182 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 MAP1BP46821 2468 aaKnown RBP6.4□□□□□ -1.38
CTNND1-233ENST00000532787 A0A1W2PRS3 328 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 TGFAP01135 160 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 FOXA3P55318 350 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-233ENST00000532787 HSD52Q0P140 79 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 CENPVQ7Z7K6 275 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-233ENST00000532787 NR2C2APQ86WQ0 139 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 VKORC1L1Q8N0U8 176 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 OR9G4Q8NGQ1 327 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 SPSB2Q99619 263 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 PGPEP1Q9NXJ5 209 aa6.4□□□□□ -1.38
CTNND1-233ENST00000532787 C15orf61A6NNL5 157 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 PATE3B3GLJ2 98 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 SNAI2O43623 268 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 IFI27P40305 119 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-233ENST00000532787 NPFFR1Q9GZQ6 430 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 SPANXA1Q9NS26 97 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 IGKV3D-11A0A0A0MRZ8 115 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 TRBV7-9A0A0J9YWB2 115 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 C17orf98A8MV24 154 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 DLEU1O43261 78 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 SNRPCP09234 159 aaKnown RBP6.4□□□□□ -1.39
CTNND1-233ENST00000532787 ATP5G3P48201 142 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 KIR3DL3Q8N743 410 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 ORAOV1Q8WV07 137 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 ST6GALNAC6Q969X2 333 aa6.4□□□□□ -1.39
CTNND1-233ENST00000532787 SDK1Q7Z5N4 2213 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 HIGD1CA8MV81 97 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 CHCHD2Q9Y6H1 151 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-233ENST00000532787 RGPD3A6NKT7 1758 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-233ENST00000532787 TRAV8-4A0A0B4J246 113 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 HOXA3O43365 443 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-233ENST00000532787 SERF1AO75920 110 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 ZNF362Q5T0B9 420 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-233ENST00000532787 PEAR1Q5VY43 1037 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-233ENST00000532787 TRBV24-1A0A075B6N3 115 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 TRAV1-1A0A0B4J248 108 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 ZNF815PA8K554 130 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 M0R381 172 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 ADMP35318 185 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 CRYBA2P53672 197 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 ERVK11-1P61568 191 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 MIR17HGQ75NE6 70 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 RNF182Q8N6D2 247 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 PLPPR1Q8TBJ4 325 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 C18orf15Q96N68 181 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 GTSF1LQ9H1H1 148 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 EPDR1Q9UM22 224 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 TRAV21A0A0B4J279 112 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 TCRBV4S1A1TA0A5B7 111 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 EFEMP2O95967 443 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 ZIC4Q8N9L1 334 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 LEAP2Q969E1 77 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 DUX3Q96PT4 197 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 CCL19Q99731 98 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 RNF126Q9BV68 326 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 FOXA2Q9Y261 457 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-233ENST00000532787 ZNFX1Q9P2E3 1918 aaKnown RBP6.39□□□□□ -1.39
CTNND1-233ENST00000532787 MYO7AQ13402 2215 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 ANKRD31Q8N7Z5 1873 aa6.39□□□□□ -1.39
CTNND1-233ENST00000532787 A0A1W2PR77 199 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 PPP1R32Q7Z5V6 425 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 FAM89BQ8N5H3 189 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 MYO16Q9Y6X6 1858 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 LTBP4Q8N2S1 1624 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 TRGV11A0A075B6L2 103 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 IGLV3-32A0A0A0MS00 114 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 NKX2-8O15522 239 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 PLNP26678 52 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 OR5AN1Q8NGI8 311 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 GPHA2Q96T91 129 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 LY96Q9Y6Y9 160 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 TRIP11Q15643 1979 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 PLXNB2O15031 1838 aa6.38□□□□□ -1.39
CTNND1-233ENST00000532787 SHISA3A0PJX4 238 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms