RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 OOSP1A8MZH6 123 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 IL4P05112 153 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 RPL30P62888 115 aaKnown RBP12.43□□□□□ -0.42
USP47-207ENST00000527733 LAMTOR1Q6IAA8 161 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 EAF1Q96JC9 268 aaPredicted RBP12.43□□□□□ -0.42
USP47-207ENST00000527733 C21orf62Q9NYP8 219 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 TRAPPC1Q9Y5R8 145 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 IGHV3-35A0A0C4DH35 117 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 FHITP49789 147 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 PGPA6NDG6 321 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 IL6RP08887 468 aaPredicted RBP12.43□□□□□ -0.42
USP47-207ENST00000527733 ZNF525Q8N782 197 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 OR4D5Q8NGN0 318 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 BET1LQ9NYM9 111 aa12.43□□□□□ -0.42
USP47-207ENST00000527733 A0A0G2JLM5 398 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 OR9G9P0C7N8 305 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 NTF3P20783 257 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 MINOS1Q5TGZ0 78 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 SLC25A48Q6ZT89 311 aaKnown RBP12.42□□□□□ -0.42
USP47-207ENST00000527733 VMO1Q7Z5L0 202 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 SLC25A33Q9BSK2 321 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 OR51M1Q9H341 326 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 MINOS1-NBL1R4GNA1 71 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 HAX1O00165 279 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 NDUFB4O95168 129 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 ARL14EPLP0DKL9 152 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 NPPCP23582 126 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 WNT10AQ9GZT5 417 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP47-207ENST00000527733 PRCDQ00LT1 54 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 HERPUD1Q15011 391 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 ZNF418Q8TF45 676 aaPredicted RBP12.42□□□□□ -0.42
USP47-207ENST00000527733 TMEM37Q8WXS4 190 aa12.42□□□□□ -0.42
USP47-207ENST00000527733 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
USP47-207ENST00000527733 C16orf92Q96LL3 132 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 CD55P08174 381 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 SLC25A16P16260 332 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 IGFBP2P18065 325 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 PDZD11Q5EBL8 140 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 NDUFS8O00217 210 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 ORM1P02763 201 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 TMEM144Q7Z5S9 345 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 RCC1LQ96I51 464 aaKnown RBP12.41□□□□□ -0.42
USP47-207ENST00000527733 DCAF16Q9NXF7 216 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
USP47-207ENST00000527733 UQCRFS1P47985 274 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 NPFFR1Q9GZQ6 430 aa12.41□□□□□ -0.42
USP47-207ENST00000527733 AURKAIP1Q9NWT8 199 aaPredicted RBP12.41□□□□□ -0.42
USP47-207ENST00000527733 FCN1O00602 326 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 RRHO14718 337 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 SLC31A2O15432 143 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 ZNF137PP52743 207 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 TPTE2P1Q5T6R2 138 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 OR52E5Q8NH55 327 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 LHFPL5Q8TAF8 219 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 TLN1Q9Y490 2541 aaKnown RBP12.4□□□□□ -0.42
USP47-207ENST00000527733 IGHV1-3A0A0C4DH29 117 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 FAM74A7A6NL05 159 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 PAX6P26367 422 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 CAMPP49913 170 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 TCL1AP56279 114 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 KLRD1Q13241 179 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 TFF3Q07654 80 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 WDR73Q6P4I2 378 aa12.4□□□□□ -0.42
USP47-207ENST00000527733 RBPMS2Q6ZRY4 209 aaKnown RBP12.4□□□□□ -0.42
USP47-207ENST00000527733 FOXA2Q9Y261 457 aaPredicted RBP12.4□□□□□ -0.42
USP47-207ENST00000527733 NMSQ5H8A3 153 aa12.4□□□□□ -0.43
USP47-207ENST00000527733 AP1S3Q96PC3 154 aa12.4□□□□□ -0.43
USP47-207ENST00000527733 RNF5Q99942 180 aa12.4□□□□□ -0.43
USP47-207ENST00000527733 S4R3C0 116 aa12.4□□□□□ -0.43
USP47-207ENST00000527733 PIEZO2Q9H5I5 2752 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 SHANK1Q9Y566 2161 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 TFPI2P48307 235 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 COX19Q49B96 90 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 ISOC2Q96AB3 205 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 NCOR1P1Q9H4R4 102 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 ZNF257Q9Y2Q1 563 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 J3KRW8 73 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 PRTN3P24158 256 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 TMEM78Q5T7P6 136 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 PRNTQ86SH4 94 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 IGKV1-6A0A0C4DH72 117 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 J3QKU1 62 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 HSBP1O75506 76 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 DLX6P56179 175 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 LINC00305Q7Z4B0 112 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 BIVMQ86UB2 503 aa12.39□□□□□ -0.43
USP47-207ENST00000527733 TSTD3H0UI37 97 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 IGKV1-5P01602 117 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 TDGF1P3P51864 188 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 SEM1Q6ZVN7 128 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 FUT9Q9Y231 359 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 LINC00473A8K010 186 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 H0Y8G0 127 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 GRNP28799 593 aaKnown RBP12.38□□□□□ -0.43
USP47-207ENST00000527733 GCHFRP30047 84 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 SIGLECL1Q8N7X8 197 aa12.38□□□□□ -0.43
USP47-207ENST00000527733 C5orf17Q8NAS9 161 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms