RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CFAP46Q8IYW2 2715 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 TRGV10A0A0A0MS01 117 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.01□□□□□ -0.01
SDC2-202ENST00000518385 RBMXL2O75526 392 aaKnown RBP15.01□□□□□ -0.01
SDC2-202ENST00000518385 RPLP1P05386 114 aaKnown RBP15.01□□□□□ -0.01
SDC2-202ENST00000518385 OR10J4P0C629 311 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 APOBEC3AP31941 199 aaPredicted RBP15.01□□□□□ -0.01
SDC2-202ENST00000518385 ERVK-16P61578 105 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 RHOBP62745 196 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 RTL8BQ17RB0 113 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 TPRX1Q8N7U7 411 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 ZNRF1Q8ND25 227 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 LINC00574Q9H8X3 128 aa15.01□□□□□ -0.01
SDC2-202ENST00000518385 SLC25A10Q9UBX3 287 aaPredicted RBP15.01□□□□□ -0.01
SDC2-202ENST00000518385 NKX6-3A6NJ46 265 aa15□□□□□ -0.01
SDC2-202ENST00000518385 B9A039 149 aa15□□□□□ -0.01
SDC2-202ENST00000518385 HMGB3O15347 200 aaKnown RBP15□□□□□ -0.01
SDC2-202ENST00000518385 REG1AP05451 166 aa15□□□□□ -0.01
SDC2-202ENST00000518385 RAB7AP51149 207 aa15□□□□□ -0.01
SDC2-202ENST00000518385 MORN2Q502X0 79 aa15□□□□□ -0.01
SDC2-202ENST00000518385 GAFA1Q96PS6 74 aa15□□□□□ -0.01
SDC2-202ENST00000518385 SMG1Q96Q15 3661 aaKnown RBP15□□□□□ -0.01
SDC2-202ENST00000518385 GNB1LQ9BYB4 327 aa15□□□□□ -0.01
SDC2-202ENST00000518385 SAP30LQ9HAJ7 183 aa15□□□□□ -0.01
SDC2-202ENST00000518385 CALYQ9NYX4 217 aa15□□□□□ -0.01
SDC2-202ENST00000518385 GNG12Q9UBI6 72 aa15□□□□□ -0.01
SDC2-202ENST00000518385 KIAA2026Q5HYC2 2103 aa15□□□□□ -0.01
SDC2-202ENST00000518385 RELNP78509 3460 aa15□□□□□ -0.01
SDC2-202ENST00000518385 SAA2-SAA4A0A096LPE2 208 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 ZNF705FA8MVS1 300 aaPredicted RBP14.99□□□□□ -0.01
SDC2-202ENST00000518385 LINC00614P0C842 121 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 ZNF705DP0CH99 300 aaPredicted RBP14.99□□□□□ -0.01
SDC2-202ENST00000518385 ZNF705BP0CI00 300 aaPredicted RBP14.99□□□□□ -0.01
SDC2-202ENST00000518385 CRISP2P16562 243 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 ATP5G3P48201 142 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 EDDM3BP56851 147 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 BRWD1-AS2P59051 145 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 OR4A16Q8NH70 328 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 RFESDQ8TAC1 157 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 C5orf30Q96GV9 206 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 TBX15Q96SF7 602 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 NPVFQ9HCQ7 196 aa14.99□□□□□ -0.01
SDC2-202ENST00000518385 KBTBD11-OT1A0A1B0GTJ5 212 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 E7EQL1 145 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 SIAH2O43255 324 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 ADMP35318 185 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 VDAC2P45880 294 aaPredicted RBP14.98□□□□□ -0.01
SDC2-202ENST00000518385 LOXL3P58215 753 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 CCL8P80075 99 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 ZNF90Q03938 601 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 OR4B1Q8NGF8 309 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 ZDHHC16Q969W1 377 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 C19orf24Q9BVV8 132 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 GGTLC1Q9BX51 225 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 PRSS46E5RG02 174 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 BTF3P20290 206 aaKnown RBP14.98□□□□□ -0.01
SDC2-202ENST00000518385 LOXP28300 417 aaPredicted RBP14.98□□□□□ -0.01
SDC2-202ENST00000518385 GPR12P47775 334 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 RPL29P47914 159 aaKnown RBP14.98□□□□□ -0.01
SDC2-202ENST00000518385 MEF2CQ06413 473 aaPredicted RBP14.98□□□□□ -0.01
SDC2-202ENST00000518385 OR10J3Q5JRS4 329 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 TREML4Q6UXN2 200 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.98□□□□□ -0.01
SDC2-202ENST00000518385 DCTN5Q9BTE1 182 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 TMEM167BQ9NRX6 74 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 PSG11Q9UQ72 335 aa14.98□□□□□ -0.01
SDC2-202ENST00000518385 PLCE1Q9P212 2302 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 ZFYVE26Q68DK2 2539 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 PPIAL4EA0A075B759 164 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 DEFB108AA8MXU0 73 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 PPIAL4DF5H284 164 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 TMEM178BH3BS89 294 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 ARL14EPLP0DKL9 152 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 PPIAL4FP0DN26 164 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 GCHFRP30047 84 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 LGALS4P56470 323 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 RPEL1Q2QD12 228 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 FAM201AQ5SY85 155 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 PRAMEF5Q5TYX0 476 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 OR5AU1Q8NGC0 362 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 DYNLRB1Q9NP97 96 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 LSM4Q9Y4Z0 139 aaKnown RBP14.97□□□□□ -0.01
SDC2-202ENST00000518385 PPIAL4AQ9Y536 164 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 DYSFO75923 2080 aa14.97□□□□□ -0.01
SDC2-202ENST00000518385 hADV38S2A0JD32 116 aa14.96□□□□□ -0.01
SDC2-202ENST00000518385 DUTP33316 252 aaKnown RBP14.96□□□□□ -0.01
SDC2-202ENST00000518385 C17orf58Q2M2W7 97 aa14.96□□□□□ -0.01
SDC2-202ENST00000518385 NEUROG1Q92886 237 aa14.96□□□□□ -0.01
SDC2-202ENST00000518385 CCL13Q99616 98 aa14.96□□□□□ -0.01
SDC2-202ENST00000518385 MRPL18Q9H0U6 180 aaKnown RBP14.96□□□□□ -0.01
SDC2-202ENST00000518385 HEYLQ9NQ87 328 aaPredicted RBP14.96□□□□□ -0.01
SDC2-202ENST00000518385 CBLN4Q9NTU7 201 aa14.96□□□□□ -0.01
SDC2-202ENST00000518385 IGHV3-43A0A0B4J1X8 118 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 PLAUP00749 431 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 IGHV3-43DP0DP04 118 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 RELQ04864 619 aaPredicted RBP14.95□□□□□ -0.02
SDC2-202ENST00000518385 CLEC12BQ2HXU8 276 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 TPTE2P1Q5T6R2 138 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 TMEM256Q8N2U0 113 aa14.95□□□□□ -0.02
SDC2-202ENST00000518385 PNKDQ8N490 385 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms