RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107		S4R3C0	116 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	CMYA5	Q8N3K9	4069 aa		11.3	□□□□□ -0.6
MATR3-238	ENST00000512107	TRBV9	A0A0B4J1U6	114 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107		A0A1W2PRX2	142 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	FAM25E	A8MYX2	175 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	OR2J3	O76001	311 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	RNASE2	P10153	161 aa	Known RBP	11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	IAPP	P10997	89 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	POLR2G	P62487	172 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	ID3	Q02535	119 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	ZNF491	Q8N8L2	437 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	OR11H7	Q8NGC8	314 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	C11orf1	Q9H5F2	150 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	GPN1	Q9HCN4	374 aa	Predicted RBP	11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	FKBP11	Q9NYL4	201 aa		11.29	□□□□□ -0.6
MATR3-238	ENST00000512107	IGLV11-55	A0A075B6I3	123 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	IGHV3-21	A0A0B4J1V1	117 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	IGHV3-11	P01762	117 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	MBP	P02686	304 aa	Predicted RBP	11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	ELANE	P08246	267 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	PAX9	P55771	341 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	MLANA	Q16655	118 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	BSX	Q3C1V8	233 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	PVRIG	Q6DKI7	326 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	TEX38	Q6PEX7	206 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107		Q6ZNX1	250 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	OR5M8	Q8NGP6	311 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	C2orf50	Q96LR7	162 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	OR5B12	Q96R08	314 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	PLEKHA3	Q9HB20	300 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	ZNF355P	Q9NSJ1	428 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	GSKIP	Q9P0R6	139 aa		11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	RCL1	Q9Y2P8	373 aa	Known RBP	11.28	□□□□□ -0.6
MATR3-238	ENST00000512107	TCRBV4S1A1T	A0A5B7	111 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	C5orf51	A6NDU8	294 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	INS-IGF2	F8WCM5	200 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	IFNA21	P01568	189 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	TRBV12-3	P01733	135 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	IGHV3-23	P01764	117 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	TRGV3	P03979	118 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	HOXA1	P49639	335 aa	Predicted RBP	11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	TPPP2	P59282	170 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	RPL23A	P62750	156 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	SLC35B1	P78383	322 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	NSUN5P1	Q3KNT7	163 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	C3orf56	Q8N813	242 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	CHAC2	Q8WUX2	184 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	ZNF414	Q96IQ9	312 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	TMEM68	Q96MH6	324 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	DUX3	Q96PT4	197 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	OR4C12	Q96R67	309 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	SRSF8	Q9BRL6	282 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	MRPL36	Q9P0J6	103 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	MGAT4C	Q9UBM8	478 aa		11.27	□□□□□ -0.61
MATR3-238	ENST00000512107	F11R	Q9Y624	299 aa	Known RBP	11.27	□□□□□ -0.61
MATR3-238	ENST00000512107		A0A1B0GVG6	124 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	MFSD2B	A6NFX1	497 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	CEBPZOS	A8MTT3	80 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107		H0YIZ8	118 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107		K7EPK0	472 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	SSNA1	O43805	119 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	CCNK	O75909	580 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	BRI3	O95415	125 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	IGHV3-48	P01763	117 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	RHOG	P84095	191 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	DEFB136	Q30KP8	78 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	THOC7	Q6I9Y2	204 aa	Known RBP	11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	ETV3L	Q6ZN32	361 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	OR4X2	Q8NGF9	303 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	DTD1	Q8TEA8	209 aa		11.26	□□□□□ -0.61
MATR3-238	ENST00000512107	C15orf62	A8K5M9	175 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107		F8W735	103 aa	Predicted RBP	11.25	□□□□□ -0.61
MATR3-238	ENST00000512107		K7EIM0	57 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	WRB	O00258	174 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	TSPAN15	O95858	294 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	SCGB1D2	O95969	90 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	RAB32	Q13637	225 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	SLC25A24	Q6NUK1	477 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	GSG1L	Q6UXU4	331 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	C8orf86	Q6ZUL3	223 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	ZNF114	Q8NC26	417 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	PDCD10	Q9BUL8	212 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	GON7	Q9BXV9	100 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	FBXL7	Q9UJT9	491 aa		11.25	□□□□□ -0.61
MATR3-238	ENST00000512107	FAM90A26	D6RGX4	464 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107		H3BP45	60 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107		H3BUA1	57 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107		I3L2K1	104 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107		I3L521	148 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107	SYNGR2	O43760	224 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107	SSSCA1	O60232	199 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107	NKX2-1	P43699	371 aa	Predicted RBP	11.24	□□□□□ -0.61
MATR3-238	ENST00000512107		Q5BKY6	102 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107	KHDC1L	Q5JSQ8	128 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107	COMMD1	Q8N668	190 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107	CCDC140	Q96MF4	163 aa		11.24	□□□□□ -0.61
MATR3-238	ENST00000512107	HEYL	Q9NQ87	328 aa	Predicted RBP	11.24	□□□□□ -0.61
MATR3-238	ENST00000512107	CDX1	P47902	265 aa	Predicted RBP	11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 167 ms