RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 RELBQ01201 579 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 TMEM30BQ3MIR4 351 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 TCF23Q7RTU1 214 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 CCL17Q92583 94 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 RNASE6Q93091 150 aaKnown RBP9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 LEAP2Q969E1 77 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 SFRP2Q96HF1 295 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 UHRF2Q96PU4 802 aa9.03□□□□□ -0.96
SH3RF1-203ENST00000508685 HIVEP3Q5T1R4 2406 aa9.02□□□□□ -0.96
SH3RF1-203ENST00000508685 TRAV38-1A0A0B4J264 116 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 A8MWP6 167 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 PLA2G2AP14555 144 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 CHRNA7P36544 502 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 RPL29P47914 159 aaKnown RBP9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 THBS3P49746 956 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 ZNF134P52741 427 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 FBXL19-AS1Q494R0 122 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 TEX36Q5VZQ5 186 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 ZNF788Q6ZQV5 615 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 GBGT1Q8N5D6 347 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 C2orf88Q9BSF0 95 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 ENY2Q9NPA8 101 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 CALYQ9NYX4 217 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 LSM4Q9Y4Z0 139 aaKnown RBP9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 DSCAML1Q8TD84 2053 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 SPTBN1Q01082 2364 aaKnown RBP9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 ARFGEF3Q5TH69 2177 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 PROP1O75360 226 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 CD3EP07766 207 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 AREGP15514 252 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 ATP5G3P48201 142 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 HSPE1P61604 102 aaKnown RBP9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 C17orf58Q2M2W7 97 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 SPINK9Q5DT21 86 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 TEPPQ6URK8 271 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 OR10G8Q8NGN5 311 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 MGST2Q99735 147 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 NDUFAF3Q9BU61 184 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 MS4A5Q9H3V2 200 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 DYNLRB1Q9NP97 96 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 TMEM140Q9NV12 185 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 TCF19Q9Y242 345 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 FOXA2Q9Y261 457 aaPredicted RBP9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 MYO18BQ8IUG5 2567 aa9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 GCN1Q92616 2671 aaKnown RBP9.02□□□□□ -0.97
SH3RF1-203ENST00000508685 C15orf61A6NNL5 157 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 C9JCJ5 164 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 RRHO14718 337 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 FCN3O75636 299 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 ARL14EPLP0DKL9 152 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 CGB3P0DN86 165 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 CGB7P0DN87 165 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 UBE2G2P60604 165 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 RAB4BP61018 213 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 RPS16P62249 146 aaKnown RBP9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 MRPL41Q8IXM3 137 aaKnown RBP9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 SGMS2Q8NHU3 365 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 DDB2Q92466 427 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 C19orf24Q9BVV8 132 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 PRO1933Q9H354 126 aa9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 SLC25A10Q9UBX3 287 aaPredicted RBP9.01□□□□□ -0.97
SH3RF1-203ENST00000508685 TRGV10A0A0A0MS01 117 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 TMEM178BH3BS89 294 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 J3QKU1 62 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 SLC31A2O15432 143 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 TAS2R60P59551 318 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 PAFAH1B2P68402 229 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 POU2AF1Q16633 256 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 RTL8BQ17RB0 113 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 COX19Q49B96 90 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 RPL39P5Q59GN2 51 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 ZNF664Q8N3J9 261 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 C11orf52Q96A22 123 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 RHOVQ96L33 236 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 IFI27L2Q9H2X8 130 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 PATZ1Q9HBE1 687 aaKnown RBP9□□□□□ -0.97
SH3RF1-203ENST00000508685 TANC2Q9HCD6 1990 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 TRBV9A0A0B4J1U6 114 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 KBTBD11-OT1A0A1B0GTJ5 212 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 ZNF705GA8MUZ8 300 aaPredicted RBP9□□□□□ -0.97
SH3RF1-203ENST00000508685 VSTM5A8MXK1 200 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 IL6RP08887 468 aaPredicted RBP9□□□□□ -0.97
SH3RF1-203ENST00000508685 NDUFB7P17568 137 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 NPY1RP25929 384 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 GCHFRP30047 84 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 APOBEC3AP31941 199 aaPredicted RBP9□□□□□ -0.97
SH3RF1-203ENST00000508685 MIC13Q5XKP0 118 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 C1orf229Q6ZS94 237 aaPredicted RBP9□□□□□ -0.97
SH3RF1-203ENST00000508685 SLC24A4Q8NFF2 622 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 OR5T1Q8NG75 326 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 FAM234AQ9H0X4 552 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 TMEM167BQ9NRX6 74 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 TMEM14BQ9NUH8 114 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 TMEM106BQ9NUM4 274 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 IL36BQ9NZH7 164 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 PRNDQ9UKY0 176 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 ZNF257Q9Y2Q1 563 aa9□□□□□ -0.97
SH3RF1-203ENST00000508685 DOCK11Q5JSL3 2073 aa8.99□□□□□ -0.97
SH3RF1-203ENST00000508685 MMP23AO75900 390 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms