RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 HLA-DPB1P04440 258 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 ZNF688P0C7X2 276 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 ZNF705DP0CH99 300 aaPredicted RBP3.75□□□□□ -1.81
NIPBL-204ENST00000504430 CGB3P0DN86 165 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 CGB7P0DN87 165 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 TMBIM6P55061 237 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 NDUFA6P56556 154 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 LINC00311Q8N616 119 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 FER1L6-AS1Q8NA97 138 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 VCXQ9H320 206 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 ZNF286AQ9HBT8 521 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 TAAR3PQ9P1P4 343 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 METTL1Q9UBP6 276 aaKnown RBP3.75□□□□□ -1.81
NIPBL-204ENST00000504430 N4BP2Q86UW6 1770 aaPredicted RBP3.75□□□□□ -1.81
NIPBL-204ENST00000504430 ZNF638Q14966 1978 aaKnown RBP3.75□□□□□ -1.81
NIPBL-204ENST00000504430 SCN8AQ9UQD0 1980 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 PEX7O00628 323 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 IGLV3-27P01718 113 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 CTSDP07339 412 aaPredicted RBP3.75□□□□□ -1.81
NIPBL-204ENST00000504430 NANOS2P60321 138 aaKnown RBP3.75□□□□□ -1.81
NIPBL-204ENST00000504430 RHOGP84095 191 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 SSX8Q7RTT4 187 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 DAND5Q8N907 189 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 NUP35Q8NFH5 326 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 CHAC1Q9BUX1 264 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 BANF2Q9H503 90 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 MOB4Q9Y3A3 225 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 FIS1Q9Y3D6 152 aa3.75□□□□□ -1.81
NIPBL-204ENST00000504430 PNMA8CA0A1B0GUJ8 204 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 MYH7BA7E2Y1 1941 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 ZNF727A8MUV8 499 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 IGLL5B9A064 214 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 UBFD1O14562 309 aaKnown RBP3.74□□□□□ -1.81
NIPBL-204ENST00000504430 EIF4G3O43432 1585 aaKnown RBP3.74□□□□□ -1.81
NIPBL-204ENST00000504430 SDC2P34741 201 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 KISS1Q15726 138 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 C3orf56Q8N813 242 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 TMEM158Q8WZ71 300 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 IGKV1-16P04430 117 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 LCN15Q6UWW0 184 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 PCP2Q8IVA1 136 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 C20orf203Q8NBC4 194 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 FAM104AQ969W3 186 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 Q9H521 79 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 KIF26BQ2KJY2 2108 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 DSPPQ9NZW4 1301 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 A0A087X0T9 212 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 TMEM72A0PK05 275 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 SOCS3O14543 225 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 PSMB8P28062 276 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 GNG4P50150 75 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 CRISP3P54108 245 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 TMEM190Q8WZ59 177 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 CIB3Q96Q77 187 aaPredicted RBP3.74□□□□□ -1.81
NIPBL-204ENST00000504430 HEXA-AS1Q9H8Q6 139 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 C8orf17Q9NRJ1 99 aa3.74□□□□□ -1.81
NIPBL-204ENST00000504430 CHD3Q12873 2000 aaKnown RBP3.73□□□□□ -1.81
NIPBL-204ENST00000504430 IGLV8-61A0A075B6I0 122 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 HIST1H1DP16402 221 aaKnown RBP3.73□□□□□ -1.81
NIPBL-204ENST00000504430 DIO3P55073 304 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 LINC00305Q7Z4B0 112 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 SPIN2AQ99865 258 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 SPIN2BQ9BPZ2 258 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 KIF13AQ9H1H9 1805 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 IZUMO1RA6ND01 250 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 IFITM5A6NNB3 132 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 CD300LBA8K4G0 201 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 FNDC10F2Z333 226 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 ELK1P19419 428 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 INPP1P49441 399 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 LCA10Q71F78 164 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 BPIFA4PQ86YQ2 179 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 OR5H2Q8NGV7 314 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 NUP210LQ5VU65 1888 aa3.73□□□□□ -1.81
NIPBL-204ENST00000504430 IGKV1-9A0A0C4DH69 117 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 BBIP1A8MTZ0 92 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 AADACL3Q5VUY0 350 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 RPL22L1Q6P5R6 122 aaKnown RBP3.72□□□□□ -1.81
NIPBL-204ENST00000504430 Q8N3U1 123 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 C7orf33Q8WU49 177 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 RBMXL1Q96E39 390 aaKnown RBP3.72□□□□□ -1.81
NIPBL-204ENST00000504430 IGHV1-45A0A0A0MS14 117 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 ZNF324O75467 553 aaPredicted RBP3.72□□□□□ -1.81
NIPBL-204ENST00000504430 C1orf140Q5VVS0 124 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 C9orf47Q6ZRZ4 202 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 GTSCR1Q86UQ5 136 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 PPTC7Q8NI37 304 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 TMEM106AQ96A25 262 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 AKAP12Q02952 1782 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 TMEM2Q9UHN6 1383 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 ARHGEF11O15085 1522 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 ARID1AO14497 2285 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 MUC21A0A0G2JKD1 596 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 SLC37A4O43826 429 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 PITX3O75364 302 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 MPV17L2Q567V2 206 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 FAM74A1Q5RGS3 127 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 IGFL3Q6UXB1 125 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 RPS19BP1Q86WX3 136 aaKnown RBP3.72□□□□□ -1.81
NIPBL-204ENST00000504430 TOMM6Q96B49 74 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms