RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TRIM16LQ309B1 348 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 DEFB114Q30KQ6 69 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 OR1L6Q8NGR2 347 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 MCFD2Q8NI22 146 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 THAP7Q9BT49 309 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-209ENST00000487617 RSL24D1Q9UHA3 163 aaKnown RBP15.47■□□□□ 0.07
HDAC4-209ENST00000487617 CEPT1Q9Y6K0 416 aa15.47■□□□□ 0.07
HDAC4-209ENST00000487617 IGHV3-21A0A0B4J1V1 117 aa15.46■□□□□ 0.07
HDAC4-209ENST00000487617 ATG12O94817 140 aa15.46■□□□□ 0.07
HDAC4-209ENST00000487617 IGKV1-5P01602 117 aa15.46■□□□□ 0.07
HDAC4-209ENST00000487617 CBLN1P23435 193 aa15.46■□□□□ 0.07
HDAC4-209ENST00000487617 AKR1C2P52895 323 aa15.46■□□□□ 0.07
HDAC4-209ENST00000487617 SP6Q3SY56 376 aa15.46■□□□□ 0.07
HDAC4-209ENST00000487617 OR4C16Q8NGL9 310 aa15.46■□□□□ 0.07
HDAC4-209ENST00000487617 CACNG8Q8WXS5 425 aa15.46■□□□□ 0.07
HDAC4-209ENST00000487617 TECRQ9NZ01 308 aaKnown RBP15.46■□□□□ 0.07
HDAC4-209ENST00000487617 C14orf166Q9Y224 244 aaKnown RBP15.46■□□□□ 0.07
HDAC4-209ENST00000487617 IGHV3-35A0A0C4DH35 117 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 TMEM213A2RRL7 107 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 CCDC160A6NGH7 325 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 OR2T8A6NH00 312 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 A8MWP6 167 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 TGOLN2O43493 480 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 GSTZ1O43708 216 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-209ENST00000487617 TNFSF8P32971 234 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 HSPE1P61604 102 aaKnown RBP15.45■□□□□ 0.06
HDAC4-209ENST00000487617 PRCDQ00LT1 54 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 OR2C3Q8N628 320 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 OR1P1Q8NH06 330 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 SCARB1Q8WTV0 552 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 C19orf73Q9NVV2 129 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 C21orf62Q9NYP8 219 aa15.45■□□□□ 0.06
HDAC4-209ENST00000487617 FABP12A6NFH5 140 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 A8MZ25 164 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 K7EIM0 57 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 GUCA2BQ16661 112 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 TM4SF20Q53R12 229 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 UNQ9165/PRO28630Q6UXU0 137 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 UXS1Q8NBZ7 420 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 NXF2Q9GZY0 626 aaKnown RBP15.44■□□□□ 0.06
HDAC4-209ENST00000487617 PLEKHA3Q9HB20 300 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 PALMDQ9NP74 551 aa15.44■□□□□ 0.06
HDAC4-209ENST00000487617 TEX13DA0A0J9YY54 714 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-209ENST00000487617 ANKRD20A5PA0PJZ0 165 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 ZNF785A8K8V0 405 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 B3GALNT1O75752 331 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 P0C879 139 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 UCP1P25874 307 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 SURF2Q15527 256 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-209ENST00000487617 SPINK9Q5DT21 86 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 UBAC2Q8NBM4 344 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 RNASE11Q8TAA1 199 aaKnown RBP15.43■□□□□ 0.06
HDAC4-209ENST00000487617 MISP3Q96FF7 219 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 BSCL2Q96G97 398 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-209ENST00000487617 PRRT1Q99946 306 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 SOSTQ9BQB4 213 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 RTBDNQ9BSG5 229 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-209ENST00000487617 TUBA4BQ9H853 241 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 UFC1Q9Y3C8 167 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 SELENOKQ9Y6D0 94 aa15.43■□□□□ 0.06
HDAC4-209ENST00000487617 A0A0B4J293 547 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 CD81P60033 236 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 ERHP84090 104 aaKnown RBP15.42■□□□□ 0.06
HDAC4-209ENST00000487617 Q56UQ5 140 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 ZNF57Q68EA5 555 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-209ENST00000487617 SPSB3Q6PJ21 355 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 OR51S1Q8NGJ8 323 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 RRNAD1Q96FB5 475 aaKnown RBP15.42■□□□□ 0.06
HDAC4-209ENST00000487617 RCHY1Q96PM5 261 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 ATP6V0BQ99437 205 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 ZNF436Q9C0F3 470 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-209ENST00000487617 ZMAT4Q9H898 229 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 SLC2A8Q9NY64 477 aa15.42■□□□□ 0.06
HDAC4-209ENST00000487617 ST8SIA3O43173 380 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 IFNA17P01571 189 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 OR5AC1P0C628 307 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 SLC35G3Q8N808 338 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 ZNF114Q8NC26 417 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 MARC2Q969Z3 335 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 WDR89Q96FK6 387 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-209ENST00000487617 NEURL2Q9BR09 285 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 CHRDL1Q9BU40 450 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 PDCD10Q9BUL8 212 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 TMEM222Q9H0R3 208 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 C5orf66Q9H5L9 145 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 NAA60Q9H7X0 242 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 MLXQ9UH92 298 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 GPR132Q9UNW8 380 aa15.41■□□□□ 0.06
HDAC4-209ENST00000487617 F8W735 103 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-209ENST00000487617 ELLP55199 621 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-209ENST00000487617 BTNL8Q6UX41 500 aa15.4■□□□□ 0.06
HDAC4-209ENST00000487617 SCP2D1Q9UJQ7 156 aa15.4■□□□□ 0.06
HDAC4-209ENST00000487617 A0A0G2JRQ6 117 aa15.39■□□□□ 0.05
HDAC4-209ENST00000487617 CD7P09564 240 aa15.39■□□□□ 0.05
HDAC4-209ENST00000487617 TMEM61Q8N0U2 210 aa15.39■□□□□ 0.05
HDAC4-209ENST00000487617 GLYATL2Q8WU03 294 aa15.39■□□□□ 0.05
HDAC4-209ENST00000487617 TMEM190Q8WZ59 177 aa15.39■□□□□ 0.05
HDAC4-209ENST00000487617 PINX1Q96BK5 328 aaKnown RBP15.39■□□□□ 0.05
HDAC4-209ENST00000487617 MCUBQ9NWR8 336 aa15.39■□□□□ 0.05
HDAC4-209ENST00000487617 GAR1Q9NY12 217 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms