RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
BRAT1-203ENST00000467558 EEF1AKMT3Q96AZ1 226 aa11.45□□□□□ -0.58
BRAT1-203ENST00000467558 PACRGQ96M98 296 aaPredicted RBP11.45□□□□□ -0.58
BRAT1-203ENST00000467558 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
BRAT1-203ENST00000467558 A1L4Q6 167 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 J3KRW8 73 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 EGR1P18146 543 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 MAS1LP35410 378 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 RSPO1Q2MKA7 263 aaPredicted RBP11.44□□□□□ -0.58
BRAT1-203ENST00000467558 WFDC3Q8IUB2 231 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 GTF3C1Q12789 2109 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 FAM106AQ4KMX7 169 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 NMSQ5H8A3 153 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 PPP1R27Q86WC6 154 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■■□□ 17.2
BRAT1-203ENST00000467558 DKK1O94907 266 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 TRGC2P03986 189 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 RELQ04864 619 aaPredicted RBP11.44□□□□□ -0.58
BRAT1-203ENST00000467558 ADIPOQQ15848 244 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 OR52E5Q8NH55 327 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 COQ2Q96H96 371 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 M0R2Z0 102 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 FGF16O43320 207 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 PSG9Q00887 426 aa11.44□□□□□ -0.58
BRAT1-203ENST00000467558 EAF1Q96JC9 268 aaPredicted RBP11.44□□□□□ -0.58
BRAT1-203ENST00000467558 NBR2O15453 112 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 SRP19P09132 144 aaKnown RBP11.43□□□□□ -0.58
BRAT1-203ENST00000467558 MDKP21741 143 aaPredicted RBP11.43□□□□□ -0.58
BRAT1-203ENST00000467558 TMEM183BQ1AE95 376 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 NBEAP1P0C6P0 100 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 NPPCP23582 126 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 PRCDQ00LT1 54 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 TEX45Q8NA69 505 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 ARPC1AQ92747 370 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 C7orf69Q9H7B7 122 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 MED13LQ71F56 2210 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 RANBP2P49792 3224 aaKnown RBP11.43□□□□□ -0.58
BRAT1-203ENST00000467558 OR5AL1P0C617 328 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 OR9G9P0C7N8 305 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 ZNF137PP52743 207 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 C21orf62Q9NYP8 219 aa11.43□□□□□ -0.58
BRAT1-203ENST00000467558 IGKV1D-17A0A075B6S4 117 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 TNFSF13O75888 250 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 CD55P08174 381 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 OR10J6PQ8NGY7 276 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 SRSF12Q8WXF0 261 aaKnown RBP11.42□□□□□ -0.58
BRAT1-203ENST00000467558 TMEM189A5PLL7 270 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 FCER1GP30273 86 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 NHLH1Q02575 133 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 HIST1H2BAQ96A08 127 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 IFT22Q9H7X7 185 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 ZGRF1Q86YA3 2104 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 IGHV3-35A0A0C4DH35 117 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 HLA-DQA1P01909 254 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 PRO3102Q9H379 93 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 BET1LQ9NYM9 111 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 GOLT1BQ9Y3E0 138 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 LAMA2P24043 3122 aaKnown RBP11.42□□□□□ -0.58
BRAT1-203ENST00000467558 CEACAM8P31997 349 aaPredicted RBP11.42□□□□□ -0.58
BRAT1-203ENST00000467558 SRSF4Q08170 494 aaKnown RBP11.42□□□□□ -0.58
BRAT1-203ENST00000467558 ELOBQ15370 118 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 C19orf35Q6ZS72 473 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 PRSS33Q8NF86 280 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 CLDND2Q8NHS1 167 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 FBXL7Q9UJT9 491 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 WDR83OSQ9Y284 106 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 AUP1Q9Y679 476 aa11.42□□□□□ -0.58
BRAT1-203ENST00000467558 H3BTX0 84 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 TMEM200BQ69YZ2 307 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 RBPMS2Q6ZRY4 209 aaKnown RBP11.41□□□□□ -0.58
BRAT1-203ENST00000467558 C5orf24Q7Z6I8 188 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 CGAP01215 116 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 IGKV1-5P01602 117 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 C3orf36Q3SXR2 165 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 WNT10AQ9GZT5 417 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 MBNL3Q9NUK0 354 aaKnown RBP11.41□□□□□ -0.58
BRAT1-203ENST00000467558 ZNF257Q9Y2Q1 563 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 RPRMLQ8N4K4 120 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
BRAT1-203ENST00000467558 IGHV1-8P0DP01 117 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 DLX6P56179 175 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 TM4SF20Q53R12 229 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 TMEM177Q53S58 311 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 C20orf204Q6ZNR8 217 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 TRGV3P03979 118 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 RPL29P47914 159 aaKnown RBP11.4□□□□□ -0.58
BRAT1-203ENST00000467558 EFNA4P52798 201 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 CD69Q07108 199 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 CENPWQ5EE01 88 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 WDR25Q64LD2 544 aaPredicted RBP11.4□□□□□ -0.58
BRAT1-203ENST00000467558 C11orf42Q8N5U0 333 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 SFRP2Q96HF1 295 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 WFDC1Q9HC57 220 aa11.4□□□□□ -0.58
BRAT1-203ENST00000467558 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
BRAT1-203ENST00000467558 HNRNPA3P51991 378 aaKnown RBP11.4□□□□□ -0.58
BRAT1-203ENST00000467558 PRB3Q04118 309 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms