RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 UBE2E2Q96LR5 201 aa12.46□□□□□ -0.41
GPC1-207ENST00000466624 KLK15Q9H2R5 256 aa12.46□□□□□ -0.41
GPC1-207ENST00000466624 ENY2Q9NPA8 101 aa12.46□□□□□ -0.41
GPC1-207ENST00000466624 ZNF355PQ9NSJ1 428 aa12.46□□□□□ -0.41
GPC1-207ENST00000466624 F11RQ9Y624 299 aaKnown RBP12.46□□□□□ -0.41
GPC1-207ENST00000466624 ANK2Q01484 3957 aa12.46□□□□□ -0.42
GPC1-207ENST00000466624 IGLV11-55A0A075B6I3 123 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 A0A0G2JLM5 398 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 FAM223BA6NKX1 122 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 TRGV3P03979 118 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 REG1AP05451 166 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 TPPP2P59282 170 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 IAH1Q2TAA2 248 aaPredicted RBP12.45□□□□□ -0.42
GPC1-207ENST00000466624 FAM223AQ8IWN6 122 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 ZNF491Q8N8L2 437 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 ZBTB8BQ8NAP8 495 aaPredicted RBP12.45□□□□□ -0.42
GPC1-207ENST00000466624 NECAP1Q8NC96 275 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 OR1P1Q8NH06 330 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 USMG5Q96IX5 58 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 OR10C1Q96KK4 312 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 FANCD2OSQ96PS1 177 aa12.45□□□□□ -0.42
GPC1-207ENST00000466624 CEBPZOSA8MTT3 80 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 ADARB2-AS1A8MUL3 147 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 CCSO14618 274 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 MED6O75586 246 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 LY86O95711 162 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 DEFA4P12838 97 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 ID3Q02535 119 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 BSXQ3C1V8 233 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 SPINK9Q5DT21 86 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 GSG1LQ6UXU4 331 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 LCNL1Q6ZST4 164 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 DTD1Q8TEA8 209 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 MS4A10Q96PG2 267 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 P2RX4Q99571 388 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 HIPK2Q9H2X6 1198 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 THYN1Q9P016 225 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 ALG5Q9Y673 324 aa12.44□□□□□ -0.42
GPC1-207ENST00000466624 SSNA1O43805 119 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 SNCAP37840 140 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 NKX2-1P43699 371 aaPredicted RBP12.43□□□□□ -0.42
GPC1-207ENST00000466624 SUB1P53999 127 aaKnown RBP eCLIP12.43□□□□□ -0.42
GPC1-207ENST00000466624 RUNX1Q01196 453 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 PVRIGQ6DKI7 326 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 C19orf35Q6ZS72 473 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 C4orf3Q8WVX3 66 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 C2orf50Q96LR7 162 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 CIB3Q96Q77 187 aaPredicted RBP12.43□□□□□ -0.42
GPC1-207ENST00000466624 RBKSQ9H477 322 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 HEYLQ9NQ87 328 aaPredicted RBP12.43□□□□□ -0.42
GPC1-207ENST00000466624 DMRT1Q9Y5R6 373 aa12.43□□□□□ -0.42
GPC1-207ENST00000466624 C13orf42A0A1B0GVH6 325 aa12.42□□□□□ -0.42
GPC1-207ENST00000466624 C5orf51A6NDU8 294 aa12.42□□□□□ -0.42
GPC1-207ENST00000466624 SYNGR2O43760 224 aa12.42□□□□□ -0.42
GPC1-207ENST00000466624 NXPH3O95157 252 aa12.42□□□□□ -0.42
GPC1-207ENST00000466624 PRH1P02810 166 aa12.42□□□□□ -0.42
GPC1-207ENST00000466624 HTR2BP41595 481 aa12.42□□□□□ -0.42
GPC1-207ENST00000466624 ATP5IP56385 69 aaPredicted RBP12.42□□□□□ -0.42
GPC1-207ENST00000466624 RHOGP84095 191 aa12.42□□□□□ -0.42
GPC1-207ENST00000466624 C2orf68Q2NKX9 166 aa12.42□□□□□ -0.42
GPC1-207ENST00000466624 FAM25EA8MYX2 175 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 GOSR2O14653 212 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 OR2J3O76001 311 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 LGALS1P09382 135 aaKnown RBP12.41□□□□□ -0.42
GPC1-207ENST00000466624 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
GPC1-207ENST00000466624 MFAP2P55001 183 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 IL15RAQ13261 267 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 C2orf83Q53S99 150 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 FAM209BQ5JX69 171 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 NOXA1Q86UR1 476 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 KLHL30-AS1Q8NEE0 82 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 FBXL7Q9UJT9 491 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 U3KQ87 197 aa12.41□□□□□ -0.42
GPC1-207ENST00000466624 I3L521 148 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 M0QZ24 198 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 CORTO00230 105 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 ATP5G2Q06055 141 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 C15orf32Q32M92 178 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 NSUN5P1Q3KNT7 163 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 HIST2H2BDQ6DRA6 164 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 SLC25A24Q6NUK1 477 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 SLC24A4Q8NFF2 622 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 VN1R17PQ8TDU5 208 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 CXorf58Q96LI9 332 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 NMES1Q9C002 83 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 GNB4Q9HAV0 340 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 GSKIPQ9P0R6 139 aa12.4□□□□□ -0.42
GPC1-207ENST00000466624 A0A1W2PRX2 142 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 NUDT19A8MXV4 375 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 WRBO00258 174 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 NDUFB8O95169 186 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 CYCSP99999 105 aaKnown RBP12.39□□□□□ -0.43
GPC1-207ENST00000466624 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 OR4F17Q8NGA8 305 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 OR4F4Q96R69 305 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 ATP6V0BQ99437 205 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 MAGT1Q9H0U3 335 aa12.39□□□□□ -0.43
GPC1-207ENST00000466624 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
GPC1-207ENST00000466624 NPY1RP25929 384 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms