RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 S100A6P06703 90 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 RHEBQ15382 184 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 ACOT6Q3I5F7 207 aaPredicted RBP14.74□□□□□ -0.05
COL9A3-205ENST00000466192 PNKDQ8N490 385 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 BBC3Q96PG8 261 aaPredicted RBP14.74□□□□□ -0.05
COL9A3-205ENST00000466192 VAX2Q9UIW0 290 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 CYB5BO43169 146 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 GATCO43716 136 aaKnown RBP14.74□□□□□ -0.05
COL9A3-205ENST00000466192 IFNA1P01562 189 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 RNF224P0DH78 156 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 OR10W1Q8NGF6 305 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 OR5B3Q8NH48 314 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 ISOC2Q96AB3 205 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 NPVFQ9HCQ7 196 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 METTL1Q9UBP6 276 aaKnown RBP14.74□□□□□ -0.05
COL9A3-205ENST00000466192 MED13LQ71F56 2210 aa14.74□□□□□ -0.05
COL9A3-205ENST00000466192 USF1P22415 310 aaPredicted RBP14.73□□□□□ -0.05
COL9A3-205ENST00000466192 RPL8P62917 257 aaKnown RBP14.73□□□□□ -0.05
COL9A3-205ENST00000466192 TMEM167AQ8TBQ9 72 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 C1orf159Q96HA4 380 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 GGTLC1Q9BX51 225 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 COMMD5Q9GZQ3 224 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 SIRT7Q9NRC8 400 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 NAV3Q8IVL0 2385 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 IGHV1-3A0A0C4DH29 117 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 ENSAO43768 121 aaKnown RBP14.73□□□□□ -0.05
COL9A3-205ENST00000466192 CDC34P49427 236 aaPredicted RBP14.73□□□□□ -0.05
COL9A3-205ENST00000466192 MIC13Q5XKP0 118 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 NIPSNAP3BQ9BS92 247 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 TUBA4BQ9H853 241 aa14.73□□□□□ -0.05
COL9A3-205ENST00000466192 E7EUB6 86 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 OVOL3O00110 214 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 OPRK1P41145 380 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 LDLRAD2Q5SZI1 272 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 FAM90A2PQ658T7 463 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 VSTM2AQ8TAG5 236 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 SSMEM1Q8WWF3 244 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 HIST1H2BAQ96A08 127 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 LSM4Q9Y4Z0 139 aaKnown RBP14.72□□□□□ -0.05
COL9A3-205ENST00000466192 INSIG2Q9Y5U4 225 aa14.72□□□□□ -0.05
COL9A3-205ENST00000466192 UTP20O75691 2785 aaKnown RBP14.71□□□□□ -0.05
COL9A3-205ENST00000466192 LY6LH3BQJ8 138 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 SLC25A17O43808 307 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 YIF1AO95070 293 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 TEPPQ6URK8 271 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 OR4A5Q8NH83 315 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 GATAD1Q8WUU5 269 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 TPSG1Q9NRR2 321 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 NDUFA4L2Q9NRX3 87 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 PXMP4Q9Y6I8 212 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 MT-ND4LP03901 98 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 ZFP36P26651 326 aaKnown RBP14.71□□□□□ -0.05
COL9A3-205ENST00000466192 MOB3BQ86TA1 216 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 P2RX4Q99571 388 aa14.71□□□□□ -0.05
COL9A3-205ENST00000466192 ZNF430Q9H8G1 570 aaPredicted RBP14.71□□□□□ -0.05
COL9A3-205ENST00000466192 AMMECR1Q9Y4X0 333 aaPredicted RBP14.71□□□□□ -0.05
COL9A3-205ENST00000466192 M0R1W7 72 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 MEF2BQ02080 365 aaPredicted RBP14.7□□□□□ -0.06
COL9A3-205ENST00000466192 PMS2P11Q13670 270 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 MRGPRG-AS1Q2M3A8 158 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 OR1L8Q8NGR8 309 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 RPEQ96AT9 228 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 ZNF462Q96JM2 2506 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 VPS13CQ709C8 3753 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 A0A1W2PPV4 95 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 CGB1A6NKQ9 187 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 LGALS7P47929 136 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 PSMB3P49720 205 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 CD81P60033 236 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 FABP9Q0Z7S8 132 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 BSXQ3C1V8 233 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 VMA21Q3ZAQ7 101 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 C10orf55Q5SWW7 151 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 OR11H6Q8NGC7 330 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 TVP23CQ96ET8 276 aa14.7□□□□□ -0.06
COL9A3-205ENST00000466192 SEC14L6B5MCN3 397 aa14.69□□□□□ -0.06
COL9A3-205ENST00000466192 IGHV2-5P01817 119 aa14.69□□□□□ -0.06
COL9A3-205ENST00000466192 CNTFRP26992 372 aa14.69□□□□□ -0.06
COL9A3-205ENST00000466192 TAGLN2P37802 199 aaKnown RBP14.69□□□□□ -0.06
COL9A3-205ENST00000466192 KLRD1Q13241 179 aa14.69□□□□□ -0.06
COL9A3-205ENST00000466192 HCP5Q6MZN7 132 aa14.69□□□□□ -0.06
COL9A3-205ENST00000466192 SLC35E3Q7Z769 313 aa14.69□□□□□ -0.06
COL9A3-205ENST00000466192 RNASE2P10153 161 aaKnown RBP14.68□□□□□ -0.06
COL9A3-205ENST00000466192 PRTN3P24158 256 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 C2orf83Q53S99 150 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 EPG5Q9HCE0 2579 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 A0A1W2PPI3 338 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 SOX15O60248 233 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 STPG3Q8N7X2 389 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 IGFBPL1Q8WX77 278 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 BPESC1Q9GZL8 116 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 CRYBG3Q68DQ2 2970 aa14.68□□□□□ -0.06
COL9A3-205ENST00000466192 ZNF727A8MUV8 499 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 FOSL1P15407 271 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 ERHP84090 104 aaKnown RBP14.67□□□□□ -0.06
COL9A3-205ENST00000466192 RAB31Q13636 194 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 MLANAQ16655 118 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 FAM24BQ8N5W8 94 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 MANBALQ9NQG1 85 aa14.67□□□□□ -0.06
COL9A3-205ENST00000466192 PAGE4O60829 102 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms