RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 AIFM2Q9BRQ8 373 aa12.34□□□□□ -0.43
UBE2D4-209ENST00000454428 NDUFAF3Q9BU61 184 aa12.34□□□□□ -0.43
UBE2D4-209ENST00000454428 NDUFA4L2Q9NRX3 87 aa12.34□□□□□ -0.43
UBE2D4-209ENST00000454428 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
UBE2D4-209ENST00000454428 TRAV14DV4A0A0A6YYC5 116 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 CYB5BO43169 146 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 SSX5O60225 188 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 DFFBO76075 338 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 NQO2P16083 231 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 MSMO1Q15800 293 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 CDNFQ49AH0 187 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 HACD4Q5VWC8 232 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 THOC7Q6I9Y2 204 aaKnown RBP12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 STHQ8IWL8 128 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 NUDCD2Q8WVJ2 157 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 CMTM3Q96MX0 182 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 DCSTAMPQ9H295 470 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 VSIRQ9H7M9 311 aa12.33□□□□□ -0.44
UBE2D4-209ENST00000454428 IFITM5A6NNB3 132 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 PTGES3LE9PB15 166 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 YIF1AO95070 293 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 HPRT1P00492 218 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 PTHLHP12272 177 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 PAFAH1B2P68402 229 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 HSD17B13Q7Z5P4 300 aaPredicted RBP12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 SECTM1Q8WVN6 248 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 CLEC5AQ9NY25 188 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 ANXA10Q9UJ72 324 aa12.32□□□□□ -0.44
UBE2D4-209ENST00000454428 TRAV2A0A0B4J234 112 aa12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 METTL21EPA6NDL7 271 aa12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 RANBP1P43487 201 aa12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 RELQ04864 619 aaPredicted RBP12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 TRAM1Q15629 374 aa12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 Q8N1X5 172 aa12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 PACRGLQ8N7B6 248 aa12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 OR1L8Q8NGR8 309 aa12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 NXF2Q9GZY0 626 aaKnown RBP12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 ATG5Q9H1Y0 275 aa12.31□□□□□ -0.44
UBE2D4-209ENST00000454428 IGHV3-66A0A0C4DH42 116 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 TMEM235A6NFC5 223 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 C16orf90A8MZG2 172 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 I3L2K1 104 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 HSMCR30P0CW71 290 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 PSMA1P25786 263 aaKnown RBP12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 TMEM41BQ5BJD5 291 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 DMBX1Q8NFW5 382 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 OR13F1Q8NGS4 319 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 LSM10Q969L4 123 aaKnown RBP12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 TBC1D24Q9ULP9 559 aa12.3□□□□□ -0.44
UBE2D4-209ENST00000454428 ERICH4A6NGS2 130 aa12.29□□□□□ -0.44
UBE2D4-209ENST00000454428 KNCNA6PVL3 124 aa12.29□□□□□ -0.44
UBE2D4-209ENST00000454428 ST8SIA3O43173 380 aa12.29□□□□□ -0.44
UBE2D4-209ENST00000454428 IFNA10P01566 189 aa12.29□□□□□ -0.44
UBE2D4-209ENST00000454428 SPP1P10451 314 aa12.29□□□□□ -0.44
UBE2D4-209ENST00000454428 ZBTB34Q8NCN2 500 aa12.29□□□□□ -0.44
UBE2D4-209ENST00000454428 HINT2Q9BX68 163 aa12.29□□□□□ -0.44
UBE2D4-209ENST00000454428 NSG2Q9Y328 171 aa12.29□□□□□ -0.44
UBE2D4-209ENST00000454428 MYCBP2O75592 4640 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 TRAV1-2A0A0B4J238 106 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 DBX1A6NMT0 343 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 DNASE2O00115 360 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 IGHV3-48P01763 117 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 CD5P06127 495 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 FCGR2CP31995 323 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 TNP2Q05952 138 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 MLLT11Q13015 90 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 ARL6IP1Q15041 203 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 C1orf134Q5TEV5 83 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 TOMM20LQ6UXN7 152 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 ZNF818PQ6ZRF7 136 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 CENPSQ8N2Z9 138 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 TMEM14BQ9NUH8 114 aa12.28□□□□□ -0.44
UBE2D4-209ENST00000454428 MARCH11A6NNE9 402 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 PPYP01298 95 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 SOHLH1Q5JUK2 328 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 UBE2UQ5VVX9 321 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 DUSP18Q8NEJ0 188 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 OR1P1Q8NH06 330 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 OR51H1Q8NH63 302 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 SLC25A46Q96AG3 418 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 TXN2Q99757 166 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 ZFAND3Q9H8U3 227 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 ACOT13Q9NPJ3 140 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 COMMD9Q9P000 198 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.45
UBE2D4-209ENST00000454428 DMBT1Q9UGM3 2413 aaPredicted RBP12.26□□□□□ -0.45
UBE2D4-209ENST00000454428 K7EQG2 157 aa12.26□□□□□ -0.45
UBE2D4-209ENST00000454428 PDCD5O14737 125 aa12.26□□□□□ -0.45
UBE2D4-209ENST00000454428 MFAP4P55083 255 aa12.26□□□□□ -0.45
UBE2D4-209ENST00000454428 CATR1Q13166 79 aa12.26□□□□□ -0.45
UBE2D4-209ENST00000454428 UBE2DNLQ8IWF7 75 aa12.26□□□□□ -0.45
UBE2D4-209ENST00000454428 SLC5A7Q9GZV3 580 aa12.26□□□□□ -0.45
UBE2D4-209ENST00000454428 RABAC1Q9UI14 185 aa12.26□□□□□ -0.45
UBE2D4-209ENST00000454428 IFNA21P01568 189 aa12.25□□□□□ -0.45
UBE2D4-209ENST00000454428 IFNA17P01571 189 aa12.25□□□□□ -0.45
UBE2D4-209ENST00000454428 RPL11P62913 178 aaKnown RBP12.25□□□□□ -0.45
UBE2D4-209ENST00000454428 MISP3Q96FF7 219 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms