RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 FKBP11Q9NYL4 201 aa12.36□□□□□ -0.43
NCKIPSD-208ENST00000454134 MTFP1Q9UDX5 166 aa12.36□□□□□ -0.43
NCKIPSD-208ENST00000454134 CEPT1Q9Y6K0 416 aa12.36□□□□□ -0.43
NCKIPSD-208ENST00000454134 K7EIM0 57 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 LYL1P12980 280 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 SPCS2Q15005 226 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 LHFPL1Q86WI0 220 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 UBAC2Q8NBM4 344 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 OR4D10Q8NGI6 311 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 OR4A16Q8NH70 328 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 ZNF436Q9C0F3 470 aaPredicted RBP12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 EDA2RQ9HAV5 297 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 PALMDQ9NP74 551 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 C21orf62Q9NYP8 219 aa12.35□□□□□ -0.43
NCKIPSD-208ENST00000454134 IGHV3OR16-8A0A075B7F1 116 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 F8W735 103 aaPredicted RBP12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 CTDSP2O14595 271 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 RGS5O15539 181 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 PPP5CP53041 499 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 PIGPP57054 158 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 ZFAND6Q6FIF0 208 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 TP53RKQ96S44 253 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 FAM110AQ9BQ89 295 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 CHRDL1Q9BU40 450 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 UFC1Q9Y3C8 167 aa12.34□□□□□ -0.43
NCKIPSD-208ENST00000454134 C8orf88P0DMB2 117 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 RND3P61587 244 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 Q56UQ5 140 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 SPINK9Q5DT21 86 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 SLC16A13Q7RTY0 426 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 ARRDC1Q8N5I2 433 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 OR52B4Q8NGK2 314 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 TMEM190Q8WZ59 177 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 MARC2Q969Z3 335 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 ISOC1Q96CN7 298 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 MISP3Q96FF7 219 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 BSCL2Q96G97 398 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 HIPK2Q9H2X6 1198 aa12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 MRPL27Q9P0M9 148 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-208ENST00000454134 ZNF207O43670 478 aaKnown RBP12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 RAB3DO95716 219 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 IGKV1-5P01602 117 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 IGHV3-48P01763 117 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 TBPP20226 339 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 ADMP35318 185 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 ELLP55199 621 aaPredicted RBP12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 PRCDQ00LT1 54 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 SP6Q3SY56 376 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 SCGB2B2Q4G0G5 96 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 SPSB3Q6PJ21 355 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 CLVS1Q8IUQ0 354 aaPredicted RBP12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 OR2C3Q8N628 320 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 TMEM229BQ8NBD8 167 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 OR1P1Q8NH06 330 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 ZNF486Q96H40 463 aaPredicted RBP12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 C20orf24Q9BUV8 137 aa12.32□□□□□ -0.44
NCKIPSD-208ENST00000454134 TAS2R19P59542 299 aa12.31□□□□□ -0.44
NCKIPSD-208ENST00000454134 HSPE1P61604 102 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-208ENST00000454134 FAAP20Q6NZ36 180 aa12.31□□□□□ -0.44
NCKIPSD-208ENST00000454134 STEAP1BQ6NZ63 245 aa12.31□□□□□ -0.44
NCKIPSD-208ENST00000454134 RBPMS2Q6ZRY4 209 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-208ENST00000454134 OR1L6Q8NGR2 347 aa12.31□□□□□ -0.44
NCKIPSD-208ENST00000454134 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
NCKIPSD-208ENST00000454134 RYR3Q15413 4870 aa12.31□□□□□ -0.44
NCKIPSD-208ENST00000454134 DNAH7Q8WXX0 4024 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 C3orf85A0A1B0GTC6 90 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 GABARAPH6UMI1 98 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 I3L2K1 104 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 NDUFA4O00483 81 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 CD74P04233 296 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 AKR1C2P52895 323 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 TERB2Q8NHR7 220 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 MARCH1Q8TCQ1 289 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 C15orf40Q8WUR7 153 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 ZNF414Q96IQ9 312 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 DAZ1Q9NQZ3 744 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 GAR1Q9NY12 217 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 COPZ2Q9P299 210 aa12.3□□□□□ -0.44
NCKIPSD-208ENST00000454134 TRAV25A0A0B4J276 109 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 A0A0B4J293 547 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 MT-CO2P00403 227 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 CTSGP08311 255 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 P0C879 139 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 TRIM16LQ309B1 348 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 ANKRD55Q3KP44 614 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 ZFAND1Q8TCF1 268 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 ATP6V0BQ99437 205 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 C5orf66Q9H5L9 145 aa12.29□□□□□ -0.44
NCKIPSD-208ENST00000454134 ST8SIA3O43173 380 aa12.28□□□□□ -0.44
NCKIPSD-208ENST00000454134 MFAP4P55083 255 aa12.28□□□□□ -0.44
NCKIPSD-208ENST00000454134 ERHP84090 104 aaKnown RBP12.28□□□□□ -0.44
NCKIPSD-208ENST00000454134 CCDC71LQ8N9Z2 235 aa12.28□□□□□ -0.44
NCKIPSD-208ENST00000454134 ZNF114Q8NC26 417 aa12.28□□□□□ -0.44
NCKIPSD-208ENST00000454134 DYNC2LI1Q8TCX1 351 aa12.28□□□□□ -0.44
NCKIPSD-208ENST00000454134 RAB2BQ8WUD1 216 aa12.28□□□□□ -0.44
NCKIPSD-208ENST00000454134 UBQLN2Q9UHD9 624 aa12.28□□□□□ -0.44
NCKIPSD-208ENST00000454134 IGHV3-49A0A0A0MS15 119 aa12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 A0A0G2JRQ6 117 aa12.27□□□□□ -0.45
NCKIPSD-208ENST00000454134 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms