RNA–Protein interactions for RNA: ENST00000437302.5

ITGB1-206, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-206ENST00000437302 CT55Q8WUE5 264 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 RASSF5Q8WWW0 418 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 TSPAN32Q96QS1 320 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 DDA1Q9BW61 102 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 NKX6-2Q9C056 277 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-206ENST00000437302 VCXQ9H320 206 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 PRTFDC1Q9NRG1 225 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 SNX12Q9UMY4 172 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 UTP11Q9Y3A2 253 aaKnown RBP2.22□□□□□ -2.05
ITGB1-206ENST00000437302 LINC00588Q9Y4M8 146 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 TRAPPC1Q9Y5R8 145 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 ICOSQ9Y6W8 199 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 PLXNB3Q9ULL4 1909 aa2.22□□□□□ -2.05
ITGB1-206ENST00000437302 ARHGAP21Q5T5U3 1957 aa2.21□□□□□ -2.05
ITGB1-206ENST00000437302 IGKV1OR2-108A0A075B7D4 117 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 A8MUN3 132 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 H3BMM0 161 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 SH2D1AO60880 128 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 WISP3O95389 354 aaPredicted RBP2.21□□□□□ -2.06
ITGB1-206ENST00000437302 IFNA21P01568 189 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 IGLV7-43P04211 117 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 SERPINE1P05121 402 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 ZNF140P52738 457 aaPredicted RBP2.21□□□□□ -2.06
ITGB1-206ENST00000437302 AKR1C2P52895 323 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 TAS2R45P59539 299 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 ARPC4P59998 168 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 TFAMQ00059 246 aaKnown RBP2.21□□□□□ -2.06
ITGB1-206ENST00000437302 GNA12Q03113 381 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 LINC00483Q53H64 154 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 TNFAIP8L3Q5GJ75 292 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 SLC25A34Q6PIV7 304 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 C16orf47Q6ZP98 133 aaPredicted RBP2.21□□□□□ -2.06
ITGB1-206ENST00000437302 GPHB5Q86YW7 130 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 SMIM20Q8N5G0 67 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 C3orf22Q8N5N4 141 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 APCDD1LQ8NCL9 501 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 OR11H6Q8NGC7 330 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 KLF14Q8TD94 323 aaPredicted RBP2.21□□□□□ -2.06
ITGB1-206ENST00000437302 PYDC1Q8WXC3 89 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 HIST1H2BAQ96A08 127 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 UBE2WQ96B02 151 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 C12orf43Q96C57 262 aaKnown RBP2.21□□□□□ -2.06
ITGB1-206ENST00000437302 ROPN1LQ96C74 230 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 KLF6Q99612 283 aaPredicted RBP2.21□□□□□ -2.06
ITGB1-206ENST00000437302 TMEM147Q9BVK8 224 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 ABCG5Q9H222 651 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 C19orf12Q9NSK7 152 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 OR5V1Q9UGF6 321 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 SLC23A2Q9UGH3 650 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 S4R3C0 116 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 U3KQK5 164 aa2.21□□□□□ -2.06
ITGB1-206ENST00000437302 BAZ2BQ9UIF8 2168 aaKnown RBP2.2□□□□□ -2.06
ITGB1-206ENST00000437302 FER1L6Q2WGJ9 1857 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 TRBV24-1A0A075B6N3 115 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 C7orf66A4D0T2 115 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 C9JCJ5 164 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 PPP5D1E7EU14 171 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 LECT2O14960 151 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 SLC25A20O43772 301 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 INAFM2P0DMQ5 153 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 IGHV3-30-3P0DP02 117 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 ATP6V0CP27449 155 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 RWDD2BP57060 319 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 DEFA1P59665 94 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 NCALDP61601 193 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 TSNQ15631 228 aaKnown RBP2.2□□□□□ -2.06
ITGB1-206ENST00000437302 MRPL51Q4U2R6 128 aaKnown RBP2.2□□□□□ -2.06
ITGB1-206ENST00000437302 ZNF880Q6PDB4 577 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 SMARCD3Q6STE5 483 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 GOLT1AQ6ZVE7 132 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 GDPD1Q8N9F7 314 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 OR4K13Q8NH42 304 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 OR13C6PQ8NH95 151 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 CD200R1Q8TD46 325 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 GNPDA2Q8TDQ7 276 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 LMX1AQ8TE12 382 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 ZHX1-C8orf76Q96EF9 292 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 ERMAPQ96PL5 475 aaPredicted RBP2.2□□□□□ -2.06
ITGB1-206ENST00000437302 GINS3Q9BRX5 216 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 BIN3Q9NQY0 253 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 C8orf4Q9NR00 106 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 TIMM22Q9Y584 194 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 ANKRD12Q6UB98 2062 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 LOC285556D6RIA3 1793 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 RTL9Q8NET4 1388 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 ROBO3Q96MS0 1386 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 ANKRD31Q8N7Z5 1873 aa2.2□□□□□ -2.06
ITGB1-206ENST00000437302 BTAF1O14981 1849 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 DOCK8Q8NF50 2099 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 LOXHD1Q8IVV2 1947 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 IGLV3-16A0A075B6K0 115 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 A0A087X0T9 212 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 A0A0B4J2C4 111 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 C16orf90A8MZG2 172 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 S1PR2O95136 353 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 CRYZL1O95825 349 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 FAM107AO95990 144 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 C1QBP02746 253 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 SHBGP04278 402 aa2.19□□□□□ -2.06
ITGB1-206ENST00000437302 SULT1A3P0DMM9 295 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 326 ms