RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CBLN1P23435 193 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 OR5I1Q13606 314 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 IGFL3Q6UXB1 125 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 Q6ZS92 163 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 OR10W1Q8NGF6 305 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 CORO2AQ92828 525 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 LINC00574Q9H8X3 128 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 ZNF257Q9Y2Q1 563 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 A8MXE2 369 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 MKRN2OSH3BPM6 223 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 TM4SF5O14894 197 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 SAA1P0DJI8 122 aaPredicted RBP9.63□□□□□ -0.87
CD44-209ENST00000433892 CCKARP32238 428 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 C11orf52Q96A22 123 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 EAF1Q96JC9 268 aaPredicted RBP9.63□□□□□ -0.87
CD44-209ENST00000433892 SFXN3Q9BWM7 321 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 TACC2O95359 2948 aa9.63□□□□□ -0.87
CD44-209ENST00000433892 hADV38S2A0JD32 116 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 FNDC10F2Z333 226 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 CRYBB3P26998 211 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 OR10J1P30954 320 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 ERVFC1-1P60608 527 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 YPEL3P61236 119 aaPredicted RBP9.62□□□□□ -0.87
CD44-209ENST00000433892 ARFGEF3Q5TH69 2177 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 ZNF600Q6ZNG1 722 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 OR9G1Q8NH87 305 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 IL36BQ9NZH7 164 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 A0A1B0GV90 55 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 C9JCJ5 164 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 OR7C2O60412 319 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 OR10J4P0C629 311 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 FRMD6-AS1P0C7T7 363 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 REG1BP48304 166 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 RBMXL3Q8N7X1 1067 aaKnown RBP9.62□□□□□ -0.87
CD44-209ENST00000433892 ZNF503Q96F45 646 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 MRPL20Q9BYC9 149 aaKnown RBP9.62□□□□□ -0.87
CD44-209ENST00000433892 CHODLQ9H9P2 273 aa9.62□□□□□ -0.87
CD44-209ENST00000433892 HELTA6NFD8 242 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 SCGB1D1O95968 90 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 AREGP15514 252 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 CCL3L1P16619 93 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 CEACAM8P31997 349 aaPredicted RBP9.61□□□□□ -0.87
CD44-209ENST00000433892 SSX2Q16385 188 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 IQCJQ1A5X6 159 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 CENPWQ5EE01 88 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 TEX36Q5VZQ5 186 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 NOL4LQ96MY1 436 aaPredicted RBP9.61□□□□□ -0.87
CD44-209ENST00000433892 FKBP11Q9NYL4 201 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 TECRQ9NZ01 308 aaKnown RBP9.61□□□□□ -0.87
CD44-209ENST00000433892 SLC25A10Q9UBX3 287 aaPredicted RBP9.61□□□□□ -0.87
CD44-209ENST00000433892 LINC00312Q9Y6C7 94 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 PCNX1Q96RV3 2341 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 SNRPCP09234 159 aaKnown RBP9.61□□□□□ -0.87
CD44-209ENST00000433892 RNASE2P10153 161 aaKnown RBP9.61□□□□□ -0.87
CD44-209ENST00000433892 CHRNB4P30926 498 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 GNG4P50150 75 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 C2orf83Q53S99 150 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 PQLC2Q6ZP29 291 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 DOLPP1Q86YN1 238 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 HARBI1Q96MB7 349 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 MRPL18Q9H0U6 180 aaKnown RBP9.61□□□□□ -0.87
CD44-209ENST00000433892 TMEM167BQ9NRX6 74 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 BET1LQ9NYM9 111 aa9.61□□□□□ -0.87
CD44-209ENST00000433892 PKDREJQ9NTG1 2253 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 E7EUB6 86 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 CD33P20138 364 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 IER3P46695 156 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 LGALS4P56470 323 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 KRTCAP3Q53RY4 240 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 WFDC8Q8IUA0 241 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 MMD2Q8IY49 270 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 OR1L6Q8NGR2 347 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 OR5B3Q8NH48 314 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 OR2T6Q8NHC8 308 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 V9GYV3 84 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 CUL9Q8IWT3 2517 aa9.6□□□□□ -0.87
CD44-209ENST00000433892 NKX6-3A6NJ46 265 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 GGTLC3B5MD39 225 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 FCN3O75636 299 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 CRYABP02511 175 aaKnown RBP9.59□□□□□ -0.87
CD44-209ENST00000433892 SUMO1P63165 101 aaKnown RBP9.59□□□□□ -0.87
CD44-209ENST00000433892 TMEM108Q6UXF1 575 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 OR8I2Q8N0Y5 310 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 OR1L8Q8NGR8 309 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 CMTM2Q8TAZ6 248 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 FAM57AQ8TBR7 257 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 SLC35E1Q96K37 410 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 MS4A10Q96PG2 267 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 COMMD5Q9GZQ3 224 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 RNASE7Q9H1E1 156 aaKnown RBP9.59□□□□□ -0.87
CD44-209ENST00000433892 GAL3ST2Q9H3Q3 398 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 TP53TG3Q9ULZ0 132 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 LY96Q9Y6Y9 160 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 H0YJW9 148 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 FCN1O00602 326 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 SPINK4O60575 86 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 APOA2P02652 100 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 CD69Q07108 199 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms