RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 C20orf24Q9BUV8 137 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 MRPS26Q9BYN8 205 aaKnown RBP12.03□□□□□ -0.48
COL18A1-205ENST00000423214 TP53TG1Q9Y2A0 90 aa12.03□□□□□ -0.48
COL18A1-205ENST00000423214 OR4C46A6NHA9 309 aa12.02□□□□□ -0.49
COL18A1-205ENST00000423214 TSPAN4O14817 238 aa12.02□□□□□ -0.49
COL18A1-205ENST00000423214 LY6G6CO95867 125 aa12.02□□□□□ -0.49
COL18A1-205ENST00000423214 MZT2AQ6P582 158 aa12.02□□□□□ -0.49
COL18A1-205ENST00000423214 Q6ZWC4 215 aa12.02□□□□□ -0.49
COL18A1-205ENST00000423214 LYG2Q86SG7 212 aa12.02□□□□□ -0.49
COL18A1-205ENST00000423214 OR6F1Q8NGZ6 308 aa12.02□□□□□ -0.49
COL18A1-205ENST00000423214 F11RQ9Y624 299 aaKnown RBP12.02□□□□□ -0.49
COL18A1-205ENST00000423214 IGHV3-21A0A0B4J1V1 117 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 TEX50A0A1B0GTY4 177 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 NDUFA4O00483 81 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 UBE2CO00762 179 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 SPRY2O43597 315 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 PGLYRP1O75594 196 aaPredicted RBP12.01□□□□□ -0.49
COL18A1-205ENST00000423214 SNAPC5O75971 98 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 ZNF182P17025 639 aaPredicted RBP12.01□□□□□ -0.49
COL18A1-205ENST00000423214 F2RP25116 425 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 ALDH3B2P48448 385 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 TSPAN5P62079 268 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 WT1-ASQ06250 92 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 Q56UQ5 140 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 GPR141Q7Z602 305 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 FXYD6Q9H0Q3 95 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 C21orf62Q9NYP8 219 aa12.01□□□□□ -0.49
COL18A1-205ENST00000423214 TNFRSF9Q07011 255 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 ODF3L2Q3SX64 289 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 CMTM1Q8IZ96 169 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 STPG3Q8N7X2 389 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 ATP6V0BQ99437 205 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 SCPEP1Q9HB40 452 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 EXTL2Q9UBQ6 330 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 NSG2Q9Y328 171 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 OR51B2Q9Y5P1 312 aa12□□□□□ -0.49
COL18A1-205ENST00000423214 IGHV3OR16-8A0A075B7F1 116 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 KIR2DL5BA0A0G2JN68 375 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 KIR2DL5BA0A0G2JPC4 375 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 ZNF207O43670 478 aaKnown RBP11.99□□□□□ -0.49
COL18A1-205ENST00000423214 KRASP01116 189 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 G6PCP35575 357 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 LPAR6P43657 344 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 SPCS2Q15005 226 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 PHLDA2Q53GA4 152 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 KIR2DL5AQ8N109 375 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 TMEM217Q8N7C4 229 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 KIR2DL5BQ8NHK3 375 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 AP3S1Q92572 193 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 TMEM56Q96MV1 263 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 CHRDL1Q9BU40 450 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 C6orf62Q9GZU0 229 aaPredicted RBP11.99□□□□□ -0.49
COL18A1-205ENST00000423214 NDUFA4L2Q9NRX3 87 aa11.99□□□□□ -0.49
COL18A1-205ENST00000423214 M0QYG6 137 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 GPR31O00270 319 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 RPL35AP18077 110 aaKnown RBP11.98□□□□□ -0.49
COL18A1-205ENST00000423214 S100GP29377 79 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 RCVRNP35243 200 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
COL18A1-205ENST00000423214 CLVS1Q8IUQ0 354 aaPredicted RBP11.98□□□□□ -0.49
COL18A1-205ENST00000423214 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 SCARB1Q8WTV0 552 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 FCAMRQ8WWV6 532 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 DGCR14Q96DF8 476 aaKnown RBP11.98□□□□□ -0.49
COL18A1-205ENST00000423214 GALNT14Q96FL9 552 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 TSC22D3Q99576 134 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 FKBP11Q9NYL4 201 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 KLK11Q9UBX7 282 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 PRNDQ9UKY0 176 aa11.98□□□□□ -0.49
COL18A1-205ENST00000423214 KLK5Q9Y337 293 aaPredicted RBP11.98□□□□□ -0.49
COL18A1-205ENST00000423214 C15orf61A6NNL5 157 aa11.97□□□□□ -0.49
COL18A1-205ENST00000423214 NUPL2O15504 423 aaKnown RBP11.97□□□□□ -0.49
COL18A1-205ENST00000423214 CTSDP07339 412 aaPredicted RBP11.97□□□□□ -0.49
COL18A1-205ENST00000423214 MFAP2P55001 183 aa11.97□□□□□ -0.49
COL18A1-205ENST00000423214 EWSR1Q01844 656 aaKnown RBP eCLIP11.97□□□□□ -0.499e-7■■■■■ 32.2
COL18A1-205ENST00000423214 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
COL18A1-205ENST00000423214 OR52I2Q8NH67 350 aa11.97□□□□□ -0.49
COL18A1-205ENST00000423214 RNF183Q96D59 192 aa11.97□□□□□ -0.49
COL18A1-205ENST00000423214 ABHD1Q96SE0 405 aa11.97□□□□□ -0.49
COL18A1-205ENST00000423214 MIXL1Q9H2W2 232 aa11.97□□□□□ -0.49
COL18A1-205ENST00000423214 C15orf62A8K5M9 175 aa11.96□□□□□ -0.49
COL18A1-205ENST00000423214 K7EIM0 57 aa11.96□□□□□ -0.49
COL18A1-205ENST00000423214 K7EMT4 169 aa11.96□□□□□ -0.49
COL18A1-205ENST00000423214 CTDSP2O14595 271 aa11.96□□□□□ -0.49
COL18A1-205ENST00000423214 RGS5O15539 181 aa11.96□□□□□ -0.49
COL18A1-205ENST00000423214 MISP3Q96FF7 219 aa11.96□□□□□ -0.49
COL18A1-205ENST00000423214 FRAS1Q86XX4 4008 aa11.95□□□□□ -0.5
COL18A1-205ENST00000423214 F8W735 103 aaPredicted RBP11.95□□□□□ -0.5
COL18A1-205ENST00000423214 YIF1AO95070 293 aa11.95□□□□□ -0.5
COL18A1-205ENST00000423214 ATF4P18848 351 aaPredicted RBP11.95□□□□□ -0.5
COL18A1-205ENST00000423214 ADMP35318 185 aa11.95□□□□□ -0.5
COL18A1-205ENST00000423214 LPCAT3Q6P1A2 487 aa11.95□□□□□ -0.5
COL18A1-205ENST00000423214 TBC1D26Q86UD7 250 aa11.95□□□□□ -0.5
COL18A1-205ENST00000423214 CADM3Q8N126 398 aa11.95□□□□□ -0.5
COL18A1-205ENST00000423214 OR1P1Q8NH06 330 aa11.95□□□□□ -0.5
COL18A1-205ENST00000423214 TMEM14BQ9NUH8 114 aa11.95□□□□□ -0.5
COL18A1-205ENST00000423214 IGKV3-7A0A075B6H7 116 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
COL18A1-205ENST00000423214 CD3DP04234 171 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms