RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CTSDP07339 412 aaPredicted RBP10.95□□□□□ -0.66
RPS28-201ENST00000417088 RPL35AP18077 110 aaKnown RBP10.95□□□□□ -0.66
RPS28-201ENST00000417088 G6PCP35575 357 aa10.95□□□□□ -0.66
RPS28-201ENST00000417088 UBAC2Q8NBM4 344 aa10.95□□□□□ -0.66
RPS28-201ENST00000417088 DGCR14Q96DF8 476 aaKnown RBP10.95□□□□□ -0.66
RPS28-201ENST00000417088 Q9H521 79 aa10.95□□□□□ -0.66
RPS28-201ENST00000417088 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
RPS28-201ENST00000417088 DBX1A6NMT0 343 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 SNAPC5O75971 98 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 CTSGP08311 255 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 NAT1P18440 290 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 Q56UQ5 140 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 OR5B3Q8NH48 314 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 GALNT14Q96FL9 552 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 S100A16Q96FQ6 103 aaKnown RBP10.94□□□□□ -0.66
RPS28-201ENST00000417088 FXYD6Q9H0Q3 95 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 SMPXQ9UHP9 88 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 PRNDQ9UKY0 176 aa10.94□□□□□ -0.66
RPS28-201ENST00000417088 C15orf62A8K5M9 175 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 ATP6V1G2O95670 118 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 TGFBR1P36897 503 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 TAS2R20P59543 309 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 NEDD8Q15843 81 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 APRG1Q8IVJ8 170 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 OR5H2Q8NGV7 314 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 TMEM56Q96MV1 263 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 RNF2Q99496 336 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 TMEM14BQ9NUH8 114 aa10.93□□□□□ -0.66
RPS28-201ENST00000417088 KLK5Q9Y337 293 aaPredicted RBP10.93□□□□□ -0.66
RPS28-201ENST00000417088 GPR31O00270 319 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 CHEK1O14757 476 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 FCGR2BP31994 310 aaPredicted RBP10.92□□□□□ -0.66
RPS28-201ENST00000417088 TAS2R46P59540 309 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 UBE2NLQ5JXB2 153 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 LYSMD2Q8IV50 215 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 CMTM1Q8IZ96 169 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 TMEM217Q8N7C4 229 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 TSPAN14Q8NG11 270 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 OR6F1Q8NGZ6 308 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 OR1P1Q8NH06 330 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 RHPN1-AS1Q9BWJ2 59 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 FKBP11Q9NYL4 201 aa10.92□□□□□ -0.66
RPS28-201ENST00000417088 IGHV7-4-1A0A0J9YVY3 117 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 C15orf61A6NNL5 157 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 I3L2K1 104 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 NUPL2O15504 423 aaKnown RBP10.91□□□□□ -0.66
RPS28-201ENST00000417088 RPS19P39019 145 aaKnown RBP10.91□□□□□ -0.66
RPS28-201ENST00000417088 RELQ04864 619 aaPredicted RBP10.91□□□□□ -0.66
RPS28-201ENST00000417088 ZNF124Q15973 351 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 TMEM69Q5SWH9 247 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 CROCCP3Q8IVE0 287 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 SAMD12Q8N8I0 201 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 TMEM116Q8NCL8 245 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 MISP3Q96FF7 219 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 OR10C1Q96KK4 312 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 TSC22D3Q99576 134 aa10.91□□□□□ -0.66
RPS28-201ENST00000417088 IGHV3-49A0A0A0MS15 119 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 YIF1AO95070 293 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 PRSS3P35030 304 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 HRH1P35367 487 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 TFPI2P48307 235 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 MFAP4P55083 255 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 PHLDA2Q53GA4 152 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 FAM90A2PQ658T7 463 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 RPP25LQ8N5L8 163 aaKnown RBP10.9□□□□□ -0.66
RPS28-201ENST00000417088 PHLDA1Q8WV24 401 aaPredicted RBP10.9□□□□□ -0.66
RPS28-201ENST00000417088 SLC25A46Q96AG3 418 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 TXN2Q99757 166 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 C6orf62Q9GZU0 229 aaPredicted RBP10.9□□□□□ -0.66
RPS28-201ENST00000417088 CSTL1Q9H114 145 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 DNAH10Q8IVF4 4471 aa10.9□□□□□ -0.66
RPS28-201ENST00000417088 IGKV3-7A0A075B6H7 116 aa10.89□□□□□ -0.67
RPS28-201ENST00000417088 MT-CO2P00403 227 aa10.89□□□□□ -0.67
RPS28-201ENST00000417088 IGHV3-48P01763 117 aa10.89□□□□□ -0.67
RPS28-201ENST00000417088 HLA-DMAP28067 261 aa10.89□□□□□ -0.67
RPS28-201ENST00000417088 CMC4P56277 68 aaPredicted RBP10.89□□□□□ -0.67
RPS28-201ENST00000417088 SEC22AQ96IW7 307 aa10.89□□□□□ -0.67
RPS28-201ENST00000417088 NXF2Q9GZY0 626 aaKnown RBP10.89□□□□□ -0.67
RPS28-201ENST00000417088 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
RPS28-201ENST00000417088 IGHV3OR16-13A0A075B7E8 117 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 TRAV14DV4A0A0A6YYC5 116 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 IGHV3-74A0A0B4J1X5 117 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 MPTX1A8MV57 137 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 IGKV1-39P01597 117 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 IGKV1D-39P04432 117 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 KCTD21Q4G0X4 260 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 TBC1D26Q86UD7 250 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 GBGT1Q8N5D6 347 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 ZNF114Q8NC26 417 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 GATAD1Q8WUU5 269 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 RARRES2Q99969 163 aa10.88□□□□□ -0.67
RPS28-201ENST00000417088 HERC2O95714 4834 aa10.87□□□□□ -0.67
RPS28-201ENST00000417088 DEDDO75618 318 aa10.87□□□□□ -0.67
RPS28-201ENST00000417088 TSPAN5P62079 268 aa10.87□□□□□ -0.67
RPS28-201ENST00000417088 LSM3P62310 102 aaKnown RBP10.87□□□□□ -0.67
RPS28-201ENST00000417088 PRCDQ00LT1 54 aa10.87□□□□□ -0.67
RPS28-201ENST00000417088 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
RPS28-201ENST00000417088 OR4A16Q8NH70 328 aa10.87□□□□□ -0.67
RPS28-201ENST00000417088 GPX8Q8TED1 209 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms