RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IGKV1D-8A0A087WSZ0 117 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 H3BMG7 143 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 DUX1O43812 170 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 MT-ND6P03923 174 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 IGLC1P0CG04 106 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 PSMB2P49721 201 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 ARG2P78540 354 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 SERF2P84101 59 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 MFAP5Q13361 173 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 PSG5Q15238 335 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 YRDCQ86U90 279 aaKnown RBP7.12□□□□□ -1.27
NDE1-202ENST00000396355 SSC4DQ8WTU2 575 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 DUSP23Q9BVJ7 150 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 LINC00470Q9BZP3 86 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 MS4A5Q9H3V2 200 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 ZNF355PQ9NSJ1 428 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 POLEQ07864 2286 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 TRAV8-1A0A0A6YYK1 113 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 ANKRD30BLA7E2S9 258 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 TSPAN2O60636 221 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 CRYBB3P26998 211 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 HES1Q14469 280 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 NRN1LQ496H8 165 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 IBA57Q5T440 356 aaKnown RBP7.12□□□□□ -1.27
NDE1-202ENST00000396355 C10orf126Q8N4M7 172 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.12□□□□□ -1.27
NDE1-202ENST00000396355 ZNF501Q96CX3 271 aaPredicted RBP7.12□□□□□ -1.27
NDE1-202ENST00000396355 DEFB126Q9BYW3 111 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 PKIBQ9C010 78 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 CUTCQ9NTM9 273 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 FAM181BA6NEQ2 426 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 PSG2P11465 335 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 YPEL5P62699 121 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 WFDC2Q14508 124 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 COA6Q5JTJ3 125 aaKnown RBP7.12□□□□□ -1.27
NDE1-202ENST00000396355 FDX2Q6P4F2 183 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 C16orf47Q6ZP98 133 aaPredicted RBP7.12□□□□□ -1.27
NDE1-202ENST00000396355 RNF144BQ7Z419 303 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 HIST1H4GQ99525 98 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 IL36BQ9NZH7 164 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 LRRK2Q5S007 2527 aa7.12□□□□□ -1.27
NDE1-202ENST00000396355 SPTY2D1-AS1A0A0U1RR47 76 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 C3orf80F5H4A9 247 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 CD1AP06126 327 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 ARL16Q0P5N6 197 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 GUSBP1Q15486 140 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 PIGYQ3MUY2 71 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 EMC4Q5J8M3 183 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 TIMM23BQ5SRD1 257 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 FAM162BQ5T6X4 162 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 PLXDC1Q8IUK5 500 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 DEFB125Q8N687 156 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 TSKUQ8WUA8 353 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 C18orf15Q96N68 181 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 BBC3Q96PG8 261 aaPredicted RBP7.11□□□□□ -1.27
NDE1-202ENST00000396355 FGF21Q9NSA1 209 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 DOCK7Q96N67 2140 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 FAM90A27PA6NNH2 459 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 CYB561P49447 251 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 FXYD7P58549 80 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 GCSAMLQ5JQS6 135 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 H2BFWTQ7Z2G1 175 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 C1QL2Q7Z5L3 287 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 SLC25A40Q8TBP6 338 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 ZNF721Q8TF20 911 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 ZNF732B4DXR9 585 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 K7EP34 96 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 DEGS1O15121 323 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 SEC11AP67812 179 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 TLN1Q9Y490 2541 aaKnown RBP7.11□□□□□ -1.27
NDE1-202ENST00000396355 MED12LQ86YW9 2145 aa7.11□□□□□ -1.27
NDE1-202ENST00000396355 GAGE12JA6NER3 117 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 K7ERJ3 54 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 GAGE7O76087 117 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 FRMD6-AS1P0C7T7 363 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 GAGE12FP0CL80 117 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 GAGE12GP0CL81 117 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 GAGE12IP0CL82 117 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 ARL14EPLP0DKL9 152 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 CD24P25063 80 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 CCR5P51681 352 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 GNG3P63215 75 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 GAGE4Q13068 117 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 SGCBQ16585 318 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 NPFFR1Q9GZQ6 430 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 COL5A1P20908 1838 aaPredicted RBP7.1□□□□□ -1.27
NDE1-202ENST00000396355 TRGV10A0A0A0MS01 117 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 CDIPTO14735 213 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 CELA3BP08861 270 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 C9orf135Q5VTT2 229 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 RPP25LQ8N5L8 163 aaKnown RBP7.1□□□□□ -1.27
NDE1-202ENST00000396355 FADS6Q8N9I5 356 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 TMED7-TICAM2A0A0A6YYA0 188 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 AMY1AP04745 511 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 PRB4P10163 310 aaPredicted RBP7.1□□□□□ -1.27
NDE1-202ENST00000396355 GATA3P23771 443 aa7.1□□□□□ -1.27
NDE1-202ENST00000396355 BCL6BQ8N143 479 aaPredicted RBP7.1□□□□□ -1.27
NDE1-202ENST00000396355 PLPPR1Q8TBJ4 325 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms