RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IGHV3-35A0A0C4DH35 117 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 M0QYG6 137 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 CYB5BO43169 146 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 SNAPC5O75971 98 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 ADMP35318 185 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 ALDH3B2P48448 385 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 MZT2AQ6P582 158 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 BTNL8Q6UX41 500 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 TMEM190Q8WZ59 177 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 ISOC1Q96CN7 298 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 TMEM56Q96MV1 263 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 CHRDL1Q9BU40 450 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 SRD5A3Q9H8P0 318 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 MTFP1Q9UDX5 166 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 UFC1Q9Y3C8 167 aa10.23□□□□□ -0.77
TNFRSF1A-202ENST00000366159 PLECQ15149 4684 aaKnown RBP10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 OR2T8A6NH00 312 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 CD3DP04234 171 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 P0C879 139 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 GPR107Q5VW38 600 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 SPSB3Q6PJ21 355 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 OR2C3Q8N628 320 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 ZNF114Q8NC26 417 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 OR1L6Q8NGR2 347 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 OR1P1Q8NH06 330 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 OR52I2Q8NH67 350 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 AP3S1Q92572 193 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 ZNF486Q96H40 463 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 HINT2Q9BX68 163 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 MIXL1Q9H2W2 232 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 C5orf66Q9H5L9 145 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 RETNQ9HD89 108 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 C21orf62Q9NYP8 219 aa10.22□□□□□ -0.77
TNFRSF1A-202ENST00000366159 FAM25AB3EWG3 89 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 FAM25CB3EWG5 89 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 FAM25GB3EWG6 89 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 I3L2K1 104 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 NDUFA4O00483 81 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 CD74P04233 296 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 IFNA6P05013 189 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 CTSGP08311 255 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 TBPP20226 339 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 S100GP29377 79 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 FCGR2BP31994 310 aaPredicted RBP10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 PRCDQ00LT1 54 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 SLC16A13Q7RTY0 426 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 ARRDC1Q8N5I2 433 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 EXTL2Q9UBQ6 330 aa10.21□□□□□ -0.78
TNFRSF1A-202ENST00000366159 IGHV3-21A0A0B4J1V1 117 aa10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 K7EMT4 169 aa10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 SCAF4O95104 1147 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 IGKV1-5P01602 117 aa10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 H2BFWTQ7Z2G1 175 aa10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 OR4D10Q8NGI6 311 aa10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 OR52B4Q8NGK2 314 aa10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 MRGPRFQ96AM1 343 aa10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 TP53RKQ96S44 253 aa10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 DAZ1Q9NQZ3 744 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-202ENST00000366159 A0A0B4J293 547 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 INS-IGF2F8WCM5 200 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 TSPAN4O14817 238 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 PI3P19957 117 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 PIGPP57054 158 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 ANKRD55Q3KP44 614 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 RNASE12Q5GAN4 147 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 RNASE10Q5GAN6 216 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 PVRIGQ6DKI7 326 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 ZFAND6Q6FIF0 208 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 TMEM229BQ8NBD8 167 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 OR4A16Q8NH70 328 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 TERB2Q8NHR7 220 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 C15orf40Q8WUR7 153 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 OR10C1Q96KK4 312 aa10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 MRPS26Q9BYN8 205 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-202ENST00000366159 EPPK1P58107 5090 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 LCE6AA0A183 80 aa10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 C15orf62A8K5M9 175 aa10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 CTDSP2O14595 271 aa10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 SPCS2Q15005 226 aa10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 IZUMO4Q1ZYL8 232 aa10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 RBPMS2Q6ZRY4 209 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 TXN2Q99757 166 aa10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 SPAG8Q99932 426 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 FAM110AQ9BQ89 295 aa10.18□□□□□ -0.78
TNFRSF1A-202ENST00000366159 C3orf85A0A1B0GTC6 90 aa10.17□□□□□ -0.78
TNFRSF1A-202ENST00000366159 GABARAPH6UMI1 98 aa10.17□□□□□ -0.78
TNFRSF1A-202ENST00000366159 SSBP1Q04837 148 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1A-202ENST00000366159 GAR1Q9NY12 217 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1A-202ENST00000366159 IGHV3OR16-8A0A075B7F1 116 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 MT-CO2P00403 227 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 PGAM2P15259 253 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 UCP1P25874 307 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 MFAP4P55083 255 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 TAS2R19P59542 299 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 ODF3L2Q3SX64 289 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 Q56UQ5 140 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 STEAP1BQ6NZ63 245 aa10.16□□□□□ -0.78
TNFRSF1A-202ENST00000366159 GPR141Q7Z602 305 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms