RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 BET1LQ9NYM9 111 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 TCF19Q9Y242 345 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 FAM96BQ9Y3D0 163 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
CD44-205ENST00000352818 UBE2L5PA0A1B0GUS4 154 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 A0A1W2PPE3 182 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 A0A1W2PPH5 198 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 C9JQL5 133 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 FNDC10F2Z333 226 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 INS-IGF2F8WCM5 200 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 H0YJW9 148 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 J3QR06 171 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 UPK2O00526 184 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 MPDU1O75352 247 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 IFNA17P01571 189 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 IGHV3-7P01780 117 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 IGHV1-8P0DP01 117 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 IL3RAP26951 378 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 OR2B8PP59922 312 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 HSPE1P61604 102 aaKnown RBP6.6□□□□□ -1.35
CD44-205ENST00000352818 DLK1P80370 383 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 AKR1C1Q04828 323 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 ZNF506Q5JVG8 444 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 OR8G2PQ6IF36 304 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 OR4A47Q6IF82 309 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 ATRAIDQ6UW56 229 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 ZNF841Q6ZN19 808 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 PDPNQ86YL7 162 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 C11orf42Q8N5U0 333 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 OR10G4Q8NGN3 311 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 OR4A5Q8NH83 315 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 OR9G1Q8NH87 305 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 ST6GALNAC6Q969X2 333 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 RSG1Q9BU20 258 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 TMEM231Q9H6L2 316 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 MIOXQ9UGB7 285 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 FBXO7Q9Y3I1 522 aa6.6□□□□□ -1.35
CD44-205ENST00000352818 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 HUWE1Q7Z6Z7 4374 aaKnown RBP6.59□□□□□ -1.35
CD44-205ENST00000352818 RBFOX3A6NFN3 312 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 C17orf112F2Z3M2 114 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 H7C2Y5 167 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 DNASE2O00115 360 aaPredicted RBP6.59□□□□□ -1.35
CD44-205ENST00000352818 TIMM23O14925 209 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 AGPAT2O15120 278 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 HSPB1P04792 205 aaKnown RBP6.59□□□□□ -1.35
CD44-205ENST00000352818 HOXA1P49639 335 aaPredicted RBP6.59□□□□□ -1.35
CD44-205ENST00000352818 RAB13P51153 203 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 PRCDQ00LT1 54 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 GUCA2BQ16661 112 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 SSX9Q7RTT3 188 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 BEND2Q8NDZ0 799 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 OR8B3Q8NGG8 313 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 OR10X1Q8NGY0 326 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 OR5B3Q8NH48 314 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 CLDND2Q8NHS1 167 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 VSTM2AQ8TAG5 236 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 TIMD4Q96H15 378 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 OR8B2Q96RD0 313 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 NABP2Q9BQ15 211 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 NPCDR1Q9BY65 106 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 MRPL20Q9BYC9 149 aaKnown RBP6.59□□□□□ -1.35
CD44-205ENST00000352818 SLC35B3Q9H1N7 401 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 TMEM133Q9H2Q1 129 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 RPRMQ9NS64 109 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 FKBP11Q9NYL4 201 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 WDR83OSQ9Y284 106 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 RFNGQ9Y644 331 aa6.59□□□□□ -1.35
CD44-205ENST00000352818 TRAV3A0A0B4J244 114 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 LCE6AA0A183 80 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 LYNX1G3V0Z9 82 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 KBTBD11O94819 623 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 IFNA10P01566 189 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 IGLV1-47P01700 117 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 SAA1P0DJI8 122 aaPredicted RBP6.58□□□□□ -1.36
CD44-205ENST00000352818 LYNX1P0DP58 116 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 FGF7P21781 194 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 COL8A2P25067 703 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 MC5RP33032 325 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 TAGLN2P37802 199 aaKnown RBP6.58□□□□□ -1.36
CD44-205ENST00000352818 RAB11AP62491 216 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 BTN1A1Q13410 526 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 ICAM4Q14773 271 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 BSXQ3C1V8 233 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 KHDC3LQ587J8 217 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 VKORC1L1Q8N0U8 176 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 BCL6BQ8N143 479 aaPredicted RBP6.58□□□□□ -1.36
CD44-205ENST00000352818 ABHD12Q8N2K0 398 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 LY6G5BQ8NDX9 201 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 OR4C13Q8NGP0 309 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 RAB1CQ92928 201 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 NEIL1Q96FI4 390 aaPredicted RBP6.58□□□□□ -1.36
CD44-205ENST00000352818 RCC1LQ96I51 464 aaKnown RBP6.58□□□□□ -1.36
CD44-205ENST00000352818 EIF5A2Q9GZV4 153 aaKnown RBP6.58□□□□□ -1.36
CD44-205ENST00000352818 ENY2Q9NPA8 101 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 HEYLQ9NQ87 328 aaPredicted RBP6.58□□□□□ -1.36
CD44-205ENST00000352818 KCNIP2Q9NS61 270 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 OR51B2Q9Y5P1 312 aa6.58□□□□□ -1.36
CD44-205ENST00000352818 TET2Q6N021 2002 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms