RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 TRAF4Q9BUZ4 470 aaPredicted RBP10.06□□□□□ -0.8
TRAF3-201ENST00000347662 SFXN3Q9BWM7 321 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 TMEM126AQ9H061 195 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 G6PC2Q9NQR9 355 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 WDR90Q96KV7 1748 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 LOC101059948A0A1B0GTJ6 334 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 H3BMM0 161 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 SCTP09683 121 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 C17orf47Q8NEP4 570 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 VKORC1Q9BQB6 163 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 PRADC1Q9BSG0 188 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 HS3ST3B1Q9Y662 390 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 EREGO14944 169 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 IGKV1D-33P01593 117 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 IGKV1-33P01594 117 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 RPL35AP18077 110 aaKnown RBP10.06□□□□□ -0.8
TRAF3-201ENST00000347662 RPRMQ9NS64 109 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 MRM2Q9UI43 246 aaKnown RBP10.06□□□□□ -0.8
TRAF3-201ENST00000347662 KLF4O43474 513 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 TIAF1O95411 115 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 C1orf122Q6ZSJ8 110 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 M0R2P5 195 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 NDUFA2O43678 99 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 CRYBB2P43320 205 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 ZNF107Q9UII5 783 aaPredicted RBP10.06□□□□□ -0.8
TRAF3-201ENST00000347662 FBXL7Q9UJT9 491 aa10.06□□□□□ -0.8
TRAF3-201ENST00000347662 IGKV1-8A0A0C4DH67 115 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 A0A0J9YW62 118 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 UNC119Q13432 240 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 IFNL4K9M1U5 179 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 SERF2P84101 59 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 ATG4DQ86TL0 474 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-201ENST00000347662 IL6RP08887 468 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-201ENST00000347662 RAG2P55895 527 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 NPIPB3Q92617 1050 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 ARID2Q68CP9 1835 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 IGHV3-73A0A0B4J1V6 119 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 SURF2Q15527 256 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-201ENST00000347662 COLCA1Q6ZS62 124 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 SPSB2Q99619 263 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 GGTLC1Q9BX51 225 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 PSME4Q14997 1843 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 PAX1P15863 534 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 AGAP20933 346 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 ERVK11-1P61568 191 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 DMRTA1Q5VZB9 504 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 CEACAM1P13688 526 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 GPHA2Q96T91 129 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 MEGF9Q9H1U4 602 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 GSN-AS1Q9NRJ2 163 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 METRNQ9UJH8 293 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 PATJQ8NI35 1801 aa10.05□□□□□ -0.8
TRAF3-201ENST00000347662 ITGB1BP1O14713 200 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 ESDP10768 282 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 C12orf73Q69YU5 71 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 PTPRQQ9UMZ3 2332 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-201ENST00000347662 PLNP26678 52 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 NIT1Q86X76 327 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 TEX45Q8NA69 505 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 FNDC4Q9H6D8 234 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-201ENST00000347662 CENPVL1A0A0U1RR11 272 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 GREM1O60565 184 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 CA11O75493 328 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 ATXN8Q156A1 80 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 FAM57AQ8TBR7 257 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 PHF3Q92576 2039 aaKnown RBP10.04□□□□□ -0.8
TRAF3-201ENST00000347662 A0A1W2PQD3 144 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 SAP30O75446 220 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 UPK3AO75631 287 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 FREM3P0C091 2139 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 DPRXA6NFQ7 191 aa10.04□□□□□ -0.8
TRAF3-201ENST00000347662 NOTCH2Q04721 2471 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 LCTP09848 1927 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 IGKV1D-42A0A075B6H8 117 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 VENTXO95231 258 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 EVI2AP22794 236 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 CEACAM21Q3KPI0 293 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 NABP2Q9BQ15 211 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 TXNDC17Q9BRA2 123 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 AHRRA9YTQ3 701 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 ZNF114Q8NC26 417 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 SCAND1P57086 179 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 FAM214BQ7L5A3 538 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 IL11P20809 199 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 CD5LO43866 347 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 ZNF600Q6ZNG1 722 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 ZNF257Q9Y2Q1 563 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 PRR33A8MZF0 331 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 GLRXP35754 106 aa10.03□□□□□ -0.8
TRAF3-201ENST00000347662 LOC102723996A0A087X1L8 192 aa10.02□□□□□ -0.81
TRAF3-201ENST00000347662 GTF3AQ92664 365 aaKnown RBP10.02□□□□□ -0.81
TRAF3-201ENST00000347662 H0Y980 276 aa10.02□□□□□ -0.81
TRAF3-201ENST00000347662 EIF4EBP2Q13542 120 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-201ENST00000347662 SCARF2Q96GP6 870 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms