RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 BCL2P10415 239 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 ZFP36P26651 326 aaKnown RBP12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 ICAM4Q14773 271 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 C2orf83Q53S99 150 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 CIARTQ8N365 385 aaPredicted RBP12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 MAPK1IP1LQ8NDC0 245 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 P2RX4Q99571 388 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 RARRES2Q99969 163 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 SSBP3Q9BWW4 388 aaPredicted RBP12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 CELSR1Q9NYQ6 3014 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 SVEP1Q4LDE5 3571 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 LOC105371242A0A075B767 164 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 RNF223E7ERA6 249 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 NDUFS6O75380 124 aaKnown RBP12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 SRP19P09132 144 aaKnown RBP12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 SLC25A16P16260 332 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 NPBWR1P48145 328 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.453e-16■□□□□ 11.3
TUBB4B-201ENST00000340384 ZNF726P1Q15940 193 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 TEPPQ6URK8 271 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 RPEQ96AT9 228 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 VAX2Q9UIW0 290 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 INSIG2Q9Y5U4 225 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 DOCK11Q5JSL3 2073 aa12.26□□□□□ -0.45
TUBB4B-201ENST00000340384 MALRD1Q5VYJ5 2156 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 ABCA2Q9BZC7 2435 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 ENSAO43768 121 aaKnown RBP12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 OR13C7P0DN81 318 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 CEACAM3P40198 252 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 RHEBQ15382 184 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 RPP25LQ8N5L8 163 aaKnown RBP12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 TEX45Q8NA69 505 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 RXFP4Q8TDU9 374 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 MANBALQ9NQG1 85 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 NDUFA4L2Q9NRX3 87 aa12.25□□□□□ -0.45
TUBB4B-201ENST00000340384 FAM74A7A6NL05 159 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 ZFP92A6NM28 416 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 M0R036 132 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 MAS1LP35410 378 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 CDC34P49427 236 aaPredicted RBP12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 FAM74A3Q4VXF1 159 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 FAM122CQ6P4D5 195 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 KIR3DL3Q8N743 410 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 TMEM170AQ8WVE7 144 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 RNF5Q99942 180 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 SMCO4Q9NRQ5 59 aa12.24□□□□□ -0.45
TUBB4B-201ENST00000340384 IGHV1-3A0A0C4DH29 117 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 A0A1W2PPV4 95 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 SEC14L6B5MCN3 397 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 IGLV2-23P01705 113 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 COX7A1P24310 79 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 PSMB3P49720 205 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 PAX2Q02962 417 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 LOXL1Q08397 574 aaPredicted RBP12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 DIAPH2-AS1Q14236 149 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 BSXQ3C1V8 233 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 C1orf122Q6ZSJ8 110 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 MOB3BQ86TA1 216 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 MMD2Q8IY49 270 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 SLC25A22Q9H936 323 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 ARHGAP32A7KAX9 2087 aa12.23□□□□□ -0.45
TUBB4B-201ENST00000340384 C22orf46C9J442 243 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 NUPL2O15504 423 aaKnown RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 IGKV1D-33P01593 117 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 IGKV1-33P01594 117 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 FGF8P55075 233 aaPredicted RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 HNF4GQ14541 408 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 TMEM249Q2WGJ8 235 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 PNKDQ8N490 385 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 OR11H6Q8NGC7 330 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 OR4P4Q8NGL7 312 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 CACNG8Q8WXS5 425 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 MGST2Q99735 147 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 NIPSNAP3BQ9BS92 247 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 GGTLC1Q9BX51 225 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 LSM4Q9Y4Z0 139 aaKnown RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 FLNAP21333 2647 aaKnown RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 TSPAN9O75954 239 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 ACTL6BO94805 426 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 OPN1MWP04001 364 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 OPN1MW2P0DN77 364 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 OPN1MW3P0DN78 364 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 RNASE2P10153 161 aaKnown RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 MYOD1P15172 320 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 HTR1DP28221 377 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 GPX4P36969 197 aaPredicted RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 AWAT1Q58HT5 328 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 RNASEH2CQ8TDP1 164 aaKnown RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 ZNF430Q9H8G1 570 aaPredicted RBP12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 RPS10P5Q9NQ39 176 aa12.22□□□□□ -0.45
TUBB4B-201ENST00000340384 CR1P17927 2039 aa12.21□□□□□ -0.45
TUBB4B-201ENST00000340384 SLC25A17O43808 307 aa12.21□□□□□ -0.46
TUBB4B-201ENST00000340384 PRTN3P24158 256 aa12.21□□□□□ -0.46
TUBB4B-201ENST00000340384 RPL29P47914 159 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms