RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 CENPVQ7Z7K6 275 aaPredicted RBP16.9■□□□□ 0.3
VRK2-201ENST00000340157 LYPD6BQ8NI32 183 aa16.9■□□□□ 0.3
VRK2-201ENST00000340157 GGACTQ9BVM4 153 aa16.9■□□□□ 0.3
VRK2-201ENST00000340157 C7orf69Q9H7B7 122 aa16.9■□□□□ 0.3
VRK2-201ENST00000340157 WDR83OSQ9Y284 106 aa16.9■□□□□ 0.3
VRK2-201ENST00000340157 UMAD1C9J7I0 102 aa16.89■□□□□ 0.29
VRK2-201ENST00000340157 RNF223E7ERA6 249 aa16.89■□□□□ 0.29
VRK2-201ENST00000340157 GNB1P62873 340 aa16.89■□□□□ 0.29
VRK2-201ENST00000340157 BLOC1S1P78537 153 aa16.89■□□□□ 0.29
VRK2-201ENST00000340157 BRD3OSQ6XYD6 125 aa16.89■□□□□ 0.29
VRK2-201ENST00000340157 HRH4Q9H3N8 390 aa16.89■□□□□ 0.29
VRK2-201ENST00000340157 VSIRQ9H7M9 311 aa16.89■□□□□ 0.29
VRK2-201ENST00000340157 TEX22C9J3V5 150 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 TRIM77I1YAP6 450 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 PRH1P02810 166 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 OR13C7P0DN81 318 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 ERHP84090 104 aaKnown RBP16.88■□□□□ 0.29
VRK2-201ENST00000340157 LOXL1Q08397 574 aaPredicted RBP16.88■□□□□ 0.29
VRK2-201ENST00000340157 TREML4Q6UXN2 200 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 HSD17B13Q7Z5P4 300 aaPredicted RBP16.88■□□□□ 0.29
VRK2-201ENST00000340157 FAM213BQ8TBF2 198 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 NPCDR1Q9BY65 106 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 ABCA1O95477 2261 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 TRAV20A0A0B4J274 112 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 ACTL6BO94805 426 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 REG1AP05451 166 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 AREGP15514 252 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 SNCAP37840 140 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 CAMLGP49069 296 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 PLGLAQ15195 96 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 EIF4E3Q8N5X7 224 aaKnown RBP16.88■□□□□ 0.29
VRK2-201ENST00000340157 LINC01356Q8N9X3 169 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 P2RX4Q99571 388 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 TIMM9Q9Y5J7 89 aa16.88■□□□□ 0.29
VRK2-201ENST00000340157 PDZD2O15018 2839 aa16.87■□□□□ 0.29
VRK2-201ENST00000340157 APELAP0DMC3 54 aa16.87■□□□□ 0.29
VRK2-201ENST00000340157 ATP5IP56385 69 aaPredicted RBP16.87■□□□□ 0.29
VRK2-201ENST00000340157 ZNF616Q08AN1 781 aa16.87■□□□□ 0.29
VRK2-201ENST00000340157 C5orf64Q2M2E5 130 aa16.87■□□□□ 0.29
VRK2-201ENST00000340157 SRSF12Q8WXF0 261 aaKnown RBP16.87■□□□□ 0.29
VRK2-201ENST00000340157 ZNF469Q96JG9 3925 aaPredicted RBP16.87■□□□□ 0.29
VRK2-201ENST00000340157 KLF17Q5JT82 389 aaPredicted RBP16.86■□□□□ 0.29
VRK2-201ENST00000340157 AKR1C8PQ5T2L2 129 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 C19orf35Q6ZS72 473 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 MARC2Q969Z3 335 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 KIAA1456Q9P272 454 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 SOX21Q9Y651 276 aaPredicted RBP16.86■□□□□ 0.29
VRK2-201ENST00000340157 SMCO3A2RU48 225 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 TMEM11P17152 192 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 MLANAQ16655 118 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 ACSM6Q6P461 480 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 RPRMQ9NS64 109 aa16.86■□□□□ 0.29
VRK2-201ENST00000340157 LSM4Q9Y4Z0 139 aaKnown RBP16.86■□□□□ 0.29
VRK2-201ENST00000340157 MFAP2P55001 183 aa16.85■□□□□ 0.29
VRK2-201ENST00000340157 SERF2P84101 59 aa16.85■□□□□ 0.29
VRK2-201ENST00000340157 MGST2Q99735 147 aa16.85■□□□□ 0.29
VRK2-201ENST00000340157 A0A0U1RQK1 487 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 I3L521 148 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 GATA3P23771 443 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 ELLP55199 621 aaPredicted RBP16.84■□□□□ 0.29
VRK2-201ENST00000340157 TOR2AQ5JU69 321 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 PVRIGQ6DKI7 326 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 Q96MF0 132 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 FAM106CPP0CH98 169 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 BRS3P32247 399 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 SRSF3P84103 164 aaKnown RBP16.84■□□□□ 0.29
VRK2-201ENST00000340157 ZNF114Q8NC26 417 aa16.84■□□□□ 0.29
VRK2-201ENST00000340157 NCBP2LA6PVI3 153 aaKnown RBP16.83■□□□□ 0.28
VRK2-201ENST00000340157 FNDC10F2Z333 226 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 IGHV4-31P0DP07 118 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 CD69Q07108 199 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 ZNF726P1Q15940 193 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 SPSB3Q6PJ21 355 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 PRSS57Q6UWY2 283 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 IL34Q6ZMJ4 242 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 Q8N9W7 124 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 FNDC4Q9H6D8 234 aaPredicted RBP16.83■□□□□ 0.28
VRK2-201ENST00000340157 NPVFQ9HCQ7 196 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 PRRC2AP48634 2157 aaKnown RBP16.83■□□□□ 0.28
VRK2-201ENST00000340157 CSPG4Q6UVK1 2322 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 ITPR2Q14571 2701 aa16.83■□□□□ 0.28
VRK2-201ENST00000340157 RAB19A4D1S5 217 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 NDPQ00604 133 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 DPPA3Q6W0C5 159 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 SSX7Q7RTT5 188 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 PIFOQ8TCI5 191 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 SSMEM1Q8WWF3 244 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 GGTLC1Q9BX51 225 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 DMRT1Q9Y5R6 373 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 UNC79Q9P2D8 2635 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 IGKV1OR2-108A0A075B7D4 117 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 AGPAT2O15120 278 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 MPDU1O75352 247 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 RAB2AP61019 212 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 GAMTQ14353 236 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 FXYD3Q14802 87 aa16.82■□□□□ 0.28
VRK2-201ENST00000340157 CREBBPQ92793 2442 aa16.81■□□□□ 0.28
VRK2-201ENST00000340157 A0A1B0GV50 99 aa16.81■□□□□ 0.28
VRK2-201ENST00000340157 CNIH1O95406 144 aa16.81■□□□□ 0.28
VRK2-201ENST00000340157 TMEM249Q2WGJ8 235 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms