RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 KIAA1549Q9HCM3 1950 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF318Q5VUA4 2279 aa11.39□□□□□ -0.59
SYNE3-201ENST00000334258 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF324O75467 553 aaPredicted RBP11.38□□□□□ -0.59
SYNE3-201ENST00000334258 TNFSF15O95150 251 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 PSG5Q15238 335 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 EFNB3Q15768 340 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 PCNX1Q96RV3 2341 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 CST9LQ9H4G1 147 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 SLC35D1Q9NTN3 355 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 BET1LQ9NYM9 111 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 GNG12Q9UBI6 72 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 V9GYV3 84 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 MT-ND6P03923 174 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF718Q3SXZ3 478 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 STPG3Q8N7X2 389 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 CHODLQ9H9P2 273 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 PLEKHA3Q9HB20 300 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 NPVFQ9HCQ7 196 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 ERVK11-1P61568 191 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 TRIP6Q15654 476 aaKnown RBP11.38□□□□□ -0.59
SYNE3-201ENST00000334258 VAMP3Q15836 100 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 STUMQ69YW2 141 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 DCTN5Q9BTE1 182 aa11.38□□□□□ -0.59
SYNE3-201ENST00000334258 M0R1X1 148 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 CTRLP40313 264 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 FOXF2Q12947 444 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 TBC1D28Q2M2D7 210 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 C6orf15Q6UXA7 325 aaPredicted RBP11.37□□□□□ -0.59
SYNE3-201ENST00000334258 Q8N976 141 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF738Q8NE65 137 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 SFXN3Q9BWM7 321 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 B4GALT7Q9UBV7 327 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 ROS1P08922 2347 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 PRRX1P54821 245 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 NHLH1Q02575 133 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 PEAR1Q5VY43 1037 aaPredicted RBP11.37□□□□□ -0.59
SYNE3-201ENST00000334258 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 PPP1R32Q7Z5V6 425 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 LOXL4Q96JB6 756 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 ICE1Q9Y2F5 2266 aa11.37□□□□□ -0.59
SYNE3-201ENST00000334258 TRGV10A0A0A0MS01 117 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 A6NJY4 79 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 OR7C2O60412 319 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 MAGEA5P43359 124 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 CX3CL1P78423 397 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 PLGLB1Q02325 96 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 Q56UQ5 140 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 NANOS1Q8WY41 292 aaKnown RBP11.36□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF331Q9NQX6 463 aaPredicted RBP11.36□□□□□ -0.59
SYNE3-201ENST00000334258 TNRC6BQ9UPQ9 1833 aaKnown RBP11.36□□□□□ -0.59
SYNE3-201ENST00000334258 C9JCJ5 164 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 SPINT2O43291 252 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 HSBP1O75506 76 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 CELA3BP08861 270 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 ACP1P24666 158 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 CLDN18P56856 261 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 OR10J3Q5JRS4 329 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 OR13A1Q8NGR1 328 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 NCOR2Q9Y618 2525 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 NCKAP5O14513 1909 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 APCSP02743 223 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 TSPOP30536 169 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 MIR17HGQ75NE6 70 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 ENY2Q9NPA8 101 aa11.36□□□□□ -0.59
SYNE3-201ENST00000334258 TNRC6AQ8NDV7 1962 aaKnown RBP11.35□□□□□ -0.59
SYNE3-201ENST00000334258 CA1P00915 261 aaPredicted RBP11.35□□□□□ -0.59
SYNE3-201ENST00000334258 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
SYNE3-201ENST00000334258 COQ2Q96H96 371 aa11.35□□□□□ -0.59
SYNE3-201ENST00000334258 BMPR1BO00238 502 aa11.35□□□□□ -0.59
SYNE3-201ENST00000334258 CA2P00918 260 aa11.35□□□□□ -0.59
SYNE3-201ENST00000334258 SLC35E4Q6ICL7 350 aa11.35□□□□□ -0.59
SYNE3-201ENST00000334258 NHLRC2Q8NBF2 726 aa11.35□□□□□ -0.59
SYNE3-201ENST00000334258 SLC25A40Q8TBP6 338 aa11.35□□□□□ -0.59
SYNE3-201ENST00000334258 FAM216AQ8WUB2 273 aa11.35□□□□□ -0.59
SYNE3-201ENST00000334258 GFRA3O60609 400 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 HLA-DQA1P01909 254 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 OR10J4P0C629 311 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 PSG1P11464 419 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 USF1P22415 310 aaPredicted RBP11.34□□□□□ -0.59
SYNE3-201ENST00000334258 TSKUQ8WUA8 353 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 CLEC7AQ9BXN2 247 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 MEGF9Q9H1U4 602 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 AMY1AP04745 511 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 IBA57Q5T440 356 aaKnown RBP11.34□□□□□ -0.59
SYNE3-201ENST00000334258 ASPHD1Q5U4P2 390 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF596Q8TC21 504 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 SSBP3Q9BWW4 388 aaPredicted RBP11.34□□□□□ -0.59
SYNE3-201ENST00000334258 TCF19Q9Y242 345 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 AHRRA9YTQ3 701 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 IGFBP2P18065 325 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 NIT1Q86X76 327 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 ZNF439Q8NDP4 499 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 CLCF1Q9UBD9 225 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
SYNE3-201ENST00000334258 CDC42EP3Q9UKI2 254 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms