RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 TMEM14DPA8MWL7 114 aa9.13□□□□□ -0.95
PKNOX1-201ENST00000291547 CEACAM4O75871 244 aa9.13□□□□□ -0.95
PKNOX1-201ENST00000291547 CGAP01215 116 aa9.13□□□□□ -0.95
PKNOX1-201ENST00000291547 THY1P04216 161 aa9.13□□□□□ -0.95
PKNOX1-201ENST00000291547 CLDND2Q8NHS1 167 aa9.13□□□□□ -0.95
PKNOX1-201ENST00000291547 SHISA3A0PJX4 238 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 C9orf172C9J069 976 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 NPFFO15130 113 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 NPSP0C0P6 89 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 SRSF4Q08170 494 aaKnown RBP9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 PMS2CLQ68D20 193 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 TEX29Q8N6K0 151 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 NPFFR1Q9GZQ6 430 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 TMEM262E9PQX1 116 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 PSMG4Q5JS54 123 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 SHISA5Q8N114 240 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 NPCDR1Q9BY65 106 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 NHP2Q9NX24 153 aaKnown RBP9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 CKS1BP61024 79 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 ZNF146Q15072 292 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 WDR82Q6UXN9 313 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 TSC2P49815 1807 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 AMBPP02760 352 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 TMEM170AQ8WVE7 144 aa9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 C11orf68Q9H3H3 251 aaKnown RBP9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 FNDC4Q9H6D8 234 aaPredicted RBP9.12□□□□□ -0.95
PKNOX1-201ENST00000291547 CCL21O00585 134 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 SERF1AO75920 110 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 LDLRAD2Q5SZI1 272 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 CFAP161Q6P656 301 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 LRTM2Q8N967 370 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 UMODP07911 640 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 OR9G1Q8NH87 305 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 TOMM7Q9P0U1 55 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 ZNF257Q9Y2Q1 563 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 RAMP1O60894 148 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 GZMBP10144 247 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 PTGDSP41222 190 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 CRYBA2P53672 197 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 ATP5IP56385 69 aaPredicted RBP9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 PCSK4Q6UW60 755 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 SAXO1Q8IYX7 474 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 G6PC2Q9NQR9 355 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 TNFRSF18Q9Y5U5 241 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 ATP5G2Q06055 141 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 SDF2L1Q9HCN8 221 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 GREB1Q4ZG55 1949 aa9.11□□□□□ -0.95
PKNOX1-201ENST00000291547 NPIPB11E5RHQ5 1161 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 H7C1H1 209 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 CELA2AP08217 269 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 ATP5G3P48201 142 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 RIPPLY3P57055 190 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 PEX7O00628 323 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 NDUFA3O95167 84 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 ACSF3Q4G176 576 aaPredicted RBP9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 LY6G6FQ5SQ64 297 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 TRBV24-1A0A075B6N3 115 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 TMEM186Q96B77 213 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 SIGMAR1Q99720 223 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 CKAP5Q14008 2032 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 PPIAL4CA0A0B4J2A2 164 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 PPIAL4GP0DN37 164 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 DUX5Q96PT3 197 aa9.1□□□□□ -0.95
PKNOX1-201ENST00000291547 IGHV3-49A0A0A0MS15 119 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 SNRPD3P62318 126 aaKnown RBP9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 LINC01590Q5TEZ4 76 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 ORMDL3Q8N138 153 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 TMEM101Q96IK0 257 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 PLXNA3P51805 1871 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 IGKV1-8A0A0C4DH67 115 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 E9PQ18 207 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 SYNGR3O43761 229 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 ASIPP42127 132 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 ZNF501Q96CX3 271 aaPredicted RBP9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 DUSP15Q9H1R2 295 aaPredicted RBP9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 RPP21Q9H633 154 aaKnown RBP9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 PGPEP1LA6NFU8 196 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 ZNF815PA8K554 130 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 H3BRM9 83 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 ZNF48Q96MX3 618 aaPredicted RBP9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 TMEM106BQ9NUM4 274 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 IGFBP2P18065 325 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 TFF3Q07654 80 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 KLF14Q8TD94 323 aaPredicted RBP9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 IFI27L2Q9H2X8 130 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 NEUROG3Q9Y4Z2 214 aa9.09□□□□□ -0.95
PKNOX1-201ENST00000291547 INTS1Q8N201 2190 aaKnown RBP9.08□□□□□ -0.96
PKNOX1-201ENST00000291547 DOCK6Q96HP0 2047 aa9.08□□□□□ -0.96
PKNOX1-201ENST00000291547 CNTFRP26992 372 aa9.08□□□□□ -0.96
PKNOX1-201ENST00000291547 SEMA5BQ9P283 1151 aa9.08□□□□□ -0.96
PKNOX1-201ENST00000291547 TBX6O95947 436 aaPredicted RBP9.08□□□□□ -0.96
PKNOX1-201ENST00000291547 LY6EQ16553 131 aa9.08□□□□□ -0.96
PKNOX1-201ENST00000291547 ASPHD2Q6ICH7 369 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms