RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 IGHV4-39P01824 125 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 FAM74A4Q5TZK3 123 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 TMEM54Q969K7 222 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 TRAV9-1A0A075B6T8 112 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 A0A087X0K7 114 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 A0A0A6YYD4 124 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 hDV102S1A0JD36 115 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 FOXI3A8MTJ6 420 aaPredicted RBP8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 A8MWP6 167 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGHV2-70P01814 119 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 STAG3L3P0CL85 134 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 LOC285556D6RIA3 1793 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGKV1D-8A0A087WSZ0 117 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGKV1D-13A0A0B4J2D9 117 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 SBF1O95248 1867 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGKV1-13P0DP09 117 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 SNHG12Q9BXW3 62 aa8.23□□□□□ -1.09
CTDSPL2-201ENST00000260327 TSPOP30536 169 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 ZNF71Q9NQZ8 489 aaPredicted RBP8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 DOCK6Q96HP0 2047 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 TEX38Q6PEX7 206 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 NUP37Q8NFH4 326 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 ZNF815PA8K554 130 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 UMODP07911 640 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 RPS20P60866 119 aaKnown RBP8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 CACNG7P62955 275 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 MEIG1Q5JSS6 88 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 PRDM14Q9GZV8 571 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 F2RL2O00254 374 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 WNT9BO14905 357 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 OR10J3Q5JRS4 329 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 GP6Q9HCN6 339 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 TRAV24A0A0B4J272 114 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 IGKV1-9A0A0C4DH69 117 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 EPOPA6NHQ4 379 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 NPIPB13A6NJU9 1138 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 NPIPB4C9JG80 1138 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 NBEAP1P0C6P0 100 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 LEPP41159 167 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 C10orf128Q5T292 105 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 ZNF319Q9P2F9 582 aa8.22□□□□□ -1.09
CTDSPL2-201ENST00000260327 C19orf54Q5BKX5 351 aa8.21□□□□□ -1.09
CTDSPL2-201ENST00000260327 OR10J6PQ8NGY7 276 aa8.21□□□□□ -1.09
CTDSPL2-201ENST00000260327 S4R3C0 116 aa8.21□□□□□ -1.09
CTDSPL2-201ENST00000260327 ZNF146Q15072 292 aa8.21□□□□□ -1.09
CTDSPL2-201ENST00000260327 WDR82Q6UXN9 313 aa8.21□□□□□ -1.09
CTDSPL2-201ENST00000260327 ITLN1Q8WWA0 313 aa8.21□□□□□ -1.09
CTDSPL2-201ENST00000260327 C19orf24Q9BVV8 132 aa8.21□□□□□ -1.09
CTDSPL2-201ENST00000260327 SFXN3Q9BWM7 321 aa8.21□□□□□ -1.09
CTDSPL2-201ENST00000260327 C9JQL5 133 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 ESDP10768 282 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 TSPAN7P41732 249 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 FADS6Q8N9I5 356 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 SPAG8Q99932 426 aaPredicted RBP8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 PKIBQ9C010 78 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 RFPL3SP0C7P2 107 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 TRIP6Q15654 476 aaKnown RBP8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 ACTL10Q5JWF8 245 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 ZNF479Q96JC4 524 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 TMEM242Q9NWH2 141 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 TMEM56-RWDD3S4R434 201 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 IGHV3OR16-13A0A075B7E8 117 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 IGHV3-74A0A0B4J1X5 117 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 A0A0G2JLM5 398 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 COX6A1P12074 109 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 HGFACQ04756 655 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 PCOLCEQ15113 449 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 SAXO1Q8IYX7 474 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 GCSAMQ8N6F7 178 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 OR4X2Q8NGF9 303 aa8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 TNS1Q9HBL0 1735 aaKnown RBP8.21□□□□□ -1.1
CTDSPL2-201ENST00000260327 TRAV12-3A0A0B4J271 114 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 A0A1W2PQM1 296 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 GNB1LQ9BYB4 327 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 GAGE12BA1L429 117 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 SYNGR3O43761 229 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 SRSF4Q08170 494 aaKnown RBP8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 GAGE13Q4V321 117 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 RTN4RL2Q86UN3 420 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 POLR3KQ9Y2Y1 108 aaPredicted RBP8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 MYLKQ15746 1914 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 A0A1B0GUS0 222 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 hCG_38984A0A1B0GV85 526 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 MPZP25189 248 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 ZNF585BQ52M93 769 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 KLF14Q8TD94 323 aaPredicted RBP8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 MRAP2Q96G30 205 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 MCRIP2Q9BUT9 160 aaKnown RBP8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 IDI2-AS1Q9NZ38 188 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 C21orf140B9A014 251 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 SUPT4H1P63272 117 aaKnown RBP8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 OR5P3Q8WZ94 311 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 LYZL4Q96KX0 146 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 ST20Q9HBF5 79 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 APC2O95996 2303 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 DNAL4O96015 105 aa8.2□□□□□ -1.1
CTDSPL2-201ENST00000260327 PSG9Q00887 426 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms