RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 RBKSQ9H477 322 aa7.94□□□□□ -1.14
HMGCL-201ENST00000235958 ENY2Q9NPA8 101 aa7.94□□□□□ -1.14
HMGCL-201ENST00000235958 HEYLQ9NQ87 328 aaPredicted RBP7.94□□□□□ -1.14
HMGCL-201ENST00000235958 INS-IGF2F8WCM5 200 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 SYNGR2O43760 224 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 MED6O75586 246 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 MBPP02686 304 aaPredicted RBP7.93□□□□□ -1.14
HMGCL-201ENST00000235958 RPLP1P05386 114 aaKnown RBP7.93□□□□□ -1.14
HMGCL-201ENST00000235958 ELANEP08246 267 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 DEFA4P12838 97 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 CXCL3P19876 107 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 SNCAP37840 140 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 NKX2-1P43699 371 aaPredicted RBP7.93□□□□□ -1.14
HMGCL-201ENST00000235958 H2BFSP57053 126 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 FCN2Q15485 313 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 SLC25A24Q6NUK1 477 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 Q6ZNX1 250 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 C19orf35Q6ZS72 473 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 MRPL41Q8IXM3 137 aaKnown RBP7.93□□□□□ -1.14
HMGCL-201ENST00000235958 RNF152Q8N8N0 203 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 WDR89Q96FK6 387 aaPredicted RBP7.93□□□□□ -1.14
HMGCL-201ENST00000235958 FANCD2OSQ96PS1 177 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 P2RX4Q99571 388 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 HIPK2Q9H2X6 1198 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 MGAT4CQ9UBM8 478 aa7.93□□□□□ -1.14
HMGCL-201ENST00000235958 WNK1Q9H4A3 2382 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 TRBV9A0A0B4J1U6 114 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 TCRBV4S1A1TA0A5B7 111 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 WRBO00258 174 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 BRI3O95415 125 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 TRGV3P03979 118 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 HOXA1P49639 335 aaPredicted RBP7.92□□□□□ -1.14
HMGCL-201ENST00000235958 MFAP2P55001 183 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 RRAS2P62070 204 aaPredicted RBP7.92□□□□□ -1.14
HMGCL-201ENST00000235958 POLR2GP62487 172 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGCL-201ENST00000235958 CYCSP99999 105 aaKnown RBP7.92□□□□□ -1.14
HMGCL-201ENST00000235958 C11orf87Q6NUJ2 197 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 OR11H7Q8NGC8 314 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 OR4X2Q8NGF9 303 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 DTD1Q8TEA8 209 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 CITED2Q99967 270 aaPredicted RBP7.92□□□□□ -1.14
HMGCL-201ENST00000235958 ZNF747Q9BV97 191 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 SLA2Q9H6Q3 261 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 ZFP57Q9NU63 452 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 DMRT1Q9Y5R6 373 aa7.92□□□□□ -1.14
HMGCL-201ENST00000235958 F11RQ9Y624 299 aaKnown RBP7.92□□□□□ -1.14
HMGCL-201ENST00000235958 IGLV11-55A0A075B6I3 123 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 H3BUA1 57 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 SCGB1D2O95969 90 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 RNASE2P10153 161 aaKnown RBP7.91□□□□□ -1.14
HMGCL-201ENST00000235958 IAPPP10997 89 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 HTR2BP41595 481 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 SUB1P53999 127 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGCL-201ENST00000235958 TPPP2P59282 170 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 RHOGP84095 191 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 KLK9Q2XQG4 91 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 ZNF491Q8N8L2 437 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 NECAP1Q8NC96 275 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 OR1P1Q8NH06 330 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 SMIM8Q96KF7 97 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 CITED1Q99966 193 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 NMES1Q9C002 83 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 FBXL7Q9UJT9 491 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 KLK9Q9UKQ9 250 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 U3KQ87 197 aa7.91□□□□□ -1.14
HMGCL-201ENST00000235958 A0A0G2JLM5 398 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 K7EPK0 472 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 CYB5BO43169 146 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 OR2J3O76001 311 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 NDUFB8O95169 186 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 TMEM50AO95807 157 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 IFNA10P01566 189 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 HIST1H1BP16401 226 aaKnown RBP7.9□□□□□ -1.14
HMGCL-201ENST00000235958 CDX1P47902 265 aaPredicted RBP7.9□□□□□ -1.14
HMGCL-201ENST00000235958 PAX9P55771 341 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 ATP5G2Q06055 141 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 RAB32Q13637 225 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 BSXQ3C1V8 233 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 C2orf83Q53S99 150 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 ZNF114Q8NC26 417 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 OR1L6Q8NGR2 347 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 MYOZ3Q8TDC0 251 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 TMEM170AQ8WVE7 144 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 USMG5Q96IX5 58 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 UBE2E2Q96LR5 201 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 CIB3Q96Q77 187 aaPredicted RBP7.9□□□□□ -1.14
HMGCL-201ENST00000235958 RAB40CQ96S21 281 aa7.9□□□□□ -1.14
HMGCL-201ENST00000235958 LSM5Q9Y4Y9 91 aaKnown RBP7.9□□□□□ -1.14
HMGCL-201ENST00000235958 TSSC4Q9Y5U2 329 aaPredicted RBP7.9□□□□□ -1.14
HMGCL-201ENST00000235958 A0A1W2PRX2 142 aa7.89□□□□□ -1.15
HMGCL-201ENST00000235958 ADARB2-AS1A8MUL3 147 aa7.89□□□□□ -1.15
HMGCL-201ENST00000235958 SSSCA1O60232 199 aa7.89□□□□□ -1.15
HMGCL-201ENST00000235958 LY86O95711 162 aa7.89□□□□□ -1.15
HMGCL-201ENST00000235958 ATP5IP56385 69 aaPredicted RBP7.89□□□□□ -1.15
HMGCL-201ENST00000235958 RPL23AP62750 156 aaKnown RBP7.89□□□□□ -1.15
HMGCL-201ENST00000235958 DEFA5Q01523 94 aa7.89□□□□□ -1.15
HMGCL-201ENST00000235958 MLANAQ16655 118 aa7.89□□□□□ -1.15
HMGCL-201ENST00000235958 C15orf32Q32M92 178 aa7.89□□□□□ -1.15
HMGCL-201ENST00000235958 KHDC1LQ5JSQ8 128 aa7.89□□□□□ -1.15
HMGCL-201ENST00000235958 SPANXN5Q5MJ07 72 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms