RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 ZNF709Q8N972 641 aa12.37□□□□□ -0.43
ATRX-211ENST00000623321 ZNF383Q8NA42 475 aa12.37□□□□□ -0.43
ATRX-211ENST00000623321 ZMAT5Q9UDW3 170 aaKnown RBP12.37□□□□□ -0.43
ATRX-211ENST00000623321 PITPNC1Q9UKF7 332 aa12.37□□□□□ -0.43
ATRX-211ENST00000623321 FAM90A9PA6NNJ1 464 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 LINC00473A8K010 186 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 F2RL2O00254 374 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 SOX15O60248 233 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 TCF23Q7RTU1 214 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 RAB24Q969Q5 203 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 RPUSD4Q96CM3 377 aaKnown RBP12.36□□□□□ -0.43
ATRX-211ENST00000623321 JPT1Q9UK76 154 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 LINC00312Q9Y6C7 94 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 SMCO3A2RU48 225 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 MARCH11A6NNE9 402 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 H7BYZ3 331 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 VENTXO95231 258 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 HIST1H1BP16401 226 aaKnown RBP12.36□□□□□ -0.43
ATRX-211ENST00000623321 TMEM249Q2WGJ8 235 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 Q3ZCU0 254 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 OR51G1Q8NGK1 321 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 OR4F5Q8NH21 305 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 OR4X1Q8NH49 305 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 H1FXQ92522 213 aaKnown RBP12.36□□□□□ -0.43
ATRX-211ENST00000623321 ANAPC16Q96DE5 110 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 NEIL1Q96FI4 390 aaPredicted RBP12.36□□□□□ -0.43
ATRX-211ENST00000623321 OR4F4Q96R69 305 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 PFDN5Q99471 154 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 CCL19Q99731 98 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 LINC00574Q9H8X3 128 aa12.36□□□□□ -0.43
ATRX-211ENST00000623321 SPTAN1Q13813 2472 aaKnown RBP12.36□□□□□ -0.43
ATRX-211ENST00000623321 TRBV23-1A0A0A0MS06 115 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 C15orf62A8K5M9 175 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
ATRX-211ENST00000623321 LTC4SQ16873 150 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
ATRX-211ENST00000623321 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 ZNF841Q6ZN19 808 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 Q8N7P7 452 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 OR5B12Q96R08 314 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 PRDM13Q9H4Q3 707 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 PSG11Q9UQ72 335 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
ATRX-211ENST00000623321 DSCAML1Q8TD84 2053 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 IGHV3-43A0A0B4J1X8 118 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 ST8SIA5O15466 376 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 YPEL1O60688 119 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 HRASP01112 189 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 IGHV3-43DP0DP04 118 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 FABP4P15090 132 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 GPR6P46095 362 aaPredicted RBP12.34□□□□□ -0.43
ATRX-211ENST00000623321 GALR1P47211 349 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
ATRX-211ENST00000623321 LOXL3P58215 753 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 HNF4GQ14541 408 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 MORN2Q502X0 79 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 PDZD11Q5EBL8 140 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 TMEM200BQ69YZ2 307 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 TMEM183AQ8IXX5 376 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 OR8B3Q8NGG8 313 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 GATAD1Q8WUU5 269 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 R3HDM4Q96D70 268 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 YPEL2Q96QA6 119 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 OR8B2Q96RD0 313 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 GFOD1Q9NXC2 390 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 GNG12Q9UBI6 72 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 RBMXL2O75526 392 aaKnown RBP12.34□□□□□ -0.43
ATRX-211ENST00000623321 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 COA6Q5JTJ3 125 aaKnown RBP12.34□□□□□ -0.43
ATRX-211ENST00000623321 HIST1H2BLQ99880 126 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 QTRT1Q9BXR0 403 aaKnown RBP12.34□□□□□ -0.43
ATRX-211ENST00000623321 GAL3ST2Q9H3Q3 398 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 IDI2-AS1Q9NZ38 188 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 GAB2Q9UQC2 676 aa12.34□□□□□ -0.43
ATRX-211ENST00000623321 PAGE4O60829 102 aa12.33□□□□□ -0.44
ATRX-211ENST00000623321 OR9G9P0C7N8 305 aa12.33□□□□□ -0.44
ATRX-211ENST00000623321 DUTP33316 252 aaKnown RBP12.33□□□□□ -0.44
ATRX-211ENST00000623321 SRP14P37108 136 aaKnown RBP12.33□□□□□ -0.44
ATRX-211ENST00000623321 PDLIM3Q53GG5 364 aaPredicted RBP12.33□□□□□ -0.44
ATRX-211ENST00000623321 PACRGQ96M98 296 aaPredicted RBP12.33□□□□□ -0.44
ATRX-211ENST00000623321 ZNF714Q96N38 554 aa12.33□□□□□ -0.44
ATRX-211ENST00000623321 DCHS2Q6V1P9 2916 aa12.32□□□□□ -0.44
ATRX-211ENST00000623321 RBFOX2O43251 390 aaKnown RBP eCLIP12.32□□□□□ -0.44
ATRX-211ENST00000623321 GGCTO75223 188 aaKnown RBP12.32□□□□□ -0.44
ATRX-211ENST00000623321 MPDU1O75352 247 aa12.32□□□□□ -0.44
ATRX-211ENST00000623321 HPRT1P00492 218 aa12.32□□□□□ -0.44
ATRX-211ENST00000623321 IGHV4-39P01824 125 aa12.32□□□□□ -0.44
ATRX-211ENST00000623321 GPR12P47775 334 aa12.32□□□□□ -0.44
ATRX-211ENST00000623321 FAM3BP58499 235 aaPredicted RBP12.32□□□□□ -0.44
ATRX-211ENST00000623321 SPINK9Q5DT21 86 aa12.32□□□□□ -0.44
ATRX-211ENST00000623321 PATZ1Q9HBE1 687 aaKnown RBP12.32□□□□□ -0.44
ATRX-211ENST00000623321 C11orf94C9JXX5 98 aa12.31□□□□□ -0.44
ATRX-211ENST00000623321 PPP5D1E7EU14 171 aa12.31□□□□□ -0.44
ATRX-211ENST00000623321 PDE6DO43924 150 aa12.31□□□□□ -0.44
ATRX-211ENST00000623321 TYMSP04818 313 aa12.31□□□□□ -0.44
ATRX-211ENST00000623321 CD1BP29016 333 aa12.31□□□□□ -0.44
ATRX-211ENST00000623321 SPCS3P61009 180 aa12.31□□□□□ -0.44
ATRX-211ENST00000623321 RPS16P62249 146 aaKnown RBP12.31□□□□□ -0.44
ATRX-211ENST00000623321 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
ATRX-211ENST00000623321 C9orf152Q5JTZ5 239 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms